hippocampus
There are 0 repository under hippocampus topic.
CompCogNeuro / ed4
Computational Cognitive Neuroscience, Fourth Edition
Language:HTML 279- RatInABox
RatInABox-Lab / RatInABox
A python package for modelling locomotion in complex environments and spatially/velocity selective cell activity.
Language:Python 155 VinAIResearch / 3D-UCaps
3D-UCaps: 3D Capsules Unet for Volumetric Image Segmentation (MICCAI 2021)
Language:Python 65khanlab / hippunfold
BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
Language:Python 44Eden-Kramer-Lab / replay_trajectory_classification
State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
Language:Jupyter Notebook 41AICONSlab / HippMapp3r
AICONSlab's hippocampal segmentation algorithm using CNNs
Language:Python 29aaryapatel007 / Hippocampal-Volume-Quantification-in-Alzheimer-Progression
Built an end-to-end AI system which features a deep learning algorithm that integrates into a clinical-grade viewer and automatically measures hippocampal volumes of new patients, as their studies are committed to the clinical imaging archive.
Language:Jupyter Notebook 12pranath / predict_alzheimers
In this project I develop a deep learning CNN model to predict Alzheimer's disease using 3D MRI medical images of the Hippocampus region of the brain.
Language:Jupyter Notebook 12MahsaShk / AD_Classification_VAE
Deep spectral-based shape features for Alzheimer’s Disease classification
Language:Python 10State space models for categorization of replay content from multiunit spiking activity. Deng et al. 2016
Language:Python 8kemerelab / UncoveringTemporalStructureHippocampus
Partial analyses to accompany "Uncovering temporal structure in hippocampal output patterns".
Language:Jupyter Notebook 8- LCN-HippoModel
PridaLab / LCN-HippoModel
The LCN-HippoModel is a biophysically realistic model of CA1 pyramidal cells aimed to get novel insights on firing dynamics in deep and superficial populations during the theta rhythm.
Language:Python 6 vgees / AI-in-3D-Medial-Imaging-Data
Application of AI in 3D Medical Imaging in quantifying Alzheimer's disease progression through automated measurement of hippocampal volume
Language:Jupyter Notebook 6clementpoiret / HSF
Hippocampal Segmentation Factory (HSF). A one-liner Deep Learning tool to segment raw T2w (and T1w) MRIs into hippocampal subfields in few seconds. Trained on 700+ manually segmented hippocampi.
Language:Python 5A semi-latent state-space model that combines movement, LFP, and ensemble spiking information to identify periods of replay and decode its content in real time. Long Tao et al., unpublished.
Language:Python 5fphammerle / freesurfer-volume-reader
Python script & library to read hippocampal volumes computed by Freesurfer & ASHS
Language:Python 4raynamharris / DissociationTest
Hippocampal transcriptomic responses to enzyme‐mediated cellular dissociation
Language:HTML 3tfiers / sharp
[Software for Master's thesis] ∘ Real-time signal detection for closed-loop, in-vivo neuroscience
Language:Python 3dancasmor / sPyMem
An open-source package that offer fully-functional spike-based bio-inspired hippocampal memory models implemented with SNN technology in the SpiNNaker hardware in Python
Language:Python 2edeno / Jadhav-2016-Data-Analysis
Code for analysis on data from Jadhav et al. 2016
Language:Jupyter Notebook 2hannesk95 / ExplainingAnatomicalShapeVariability
This work showcases a variational graph autoencoder disentanglement using 3D mesh data.
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proxyma-centauri / c_unet
Pytorch implementation of a G-CNN with a U-Net architecture, using discrete 3D roto-translational equivariant convolutions, to segment the hippocampal subfields on 3D MRIs.
Language:Python 2TomGeorge1234 / ThetaSequencesAreEligibilityTraces
Code for my paper: "Theta sequences as eligibility traces: a biological solution to credit assignment"
Language:Jupyter Notebook 2FortinLab / Shahbaba_et_al_2021
Hippocampal ensembles represent sequential relationships among an extended sequence of nonspatial events
Language:Jupyter Notebook 1KLichter / Lichter-et-al-2022_CellRep_3D-vesicle-python
SynapticVes-Py. Python code to support 3D quantitative analysis of presynaptic active zones in hippocampal mossy fiber boutons using electron tomograms and IMOD model output.
Language:Jupyter Notebook 1marcelomatheusgauy / hippocampal_sequence_replay
Code for the paper "A hippocampal model for behavioral time acquisition and fast bidirectional replay of spatio-temporal memory sequences"
Language:Julia 1OmarLaham / udacity-healthcare-ai-3d-imaging-alzheimer
The final project of "Applying AI to 3D Medical Imaging Data" from "AI for Healthcare" nanodegree - Udacity.
Language:Jupyter Notebook 1- Language:Python 1
soltesz-lab / dentate
Full-scale biophysical model of the dentate gyrus
Language:Jupyter Notebook 1sulagnag / Udacity_AI_Healthcare_P2_Hippocampus-Volume-Quantification
hippocampus volume quantification
Language:Jupyter Notebook 1SynapticSage / ThetaCoherence
Initial exploratory code into coherence at track points of interest.
Language:MATLAB 1tortlab / hpc-pfc-interactions
Scripts for reproducing the figures of Hippocampal-Prefrontal Interactions during Spatial Decision-Making, Tavares & Tort 2020.
Language:MATLAB 1- Language:Python 0
KeremKurban / transformer-xl
Base code for NeuroIPS 2023 paper on NMDA activation function on transformers
Language:PythonSanjay71013 / ScanHippoHealth-Medical-MRI-Segmentation
ScanHippoHealth: MRI segmentation using 3D-Unet on Medical Segmentation Decathlon data. Flask app with secure authentication, predicting and displaying six slices of input MRI alongside masks for precise hippocampus segmentation. Contributions welcome to enhance medical image analysis for better diagnostics.
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