neuron-simulations

There are 1 repository under neuron-simulations topic.

• shohan-pherones / snake-game-self-played

  This is a self-played snake game that uses genetic algorithm and neural network to learn and improve its gameplay over time. The game is built using the p5.js library for graphics and user interface, and the tensorflow.js and neataptic libraries for machine learning.

  artificial-intelligence-algorithmsartificial-neural-networksgenetic-algorithmneat-algorithmneatapticneural-networkneuronneuron-simulationsnnp5jssnake-gametensorflow
  Language:JavaScript 12

• BlueBrain / neurodamus

  A BBP Simulation Control application for NEURON

  simulationcellularbrainneuron-simulations
  Language:Python 8

• c2m2 / Neuro-VISOR

  A research tool based in virtual reality. Produced by the Center for Computational Mathematics and Modeling at Temple University

  meshing-algorithmsmolecular-dynamics-simulationneuron-simulationsnumerical-methodsoculusoculus-riftunity3d-gamesvirtual-reality
  Language:C# 8

• MarcelBeining / T2N

  T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It was published in (and should be cited this way): Beining M, Mongiat, LA, Schwarzacher SW, Cuntz H, Jedlicka P: T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells. eLife 2017; 6:e26517

  neuronmatlabmatlab-toolboxneuron-simulationsmorphologiescompartmental-modelsbiophysicalanalysisinterface
  Language:MATLAB 8

• mcellteam / neuron_launcher

  Set of tools in Blender to create models for MCell/Neuron hybrid simulations

  neuron-simulationsmcellswcblendercable-model
  Language:C++ 7
• LCN-HippoModel

  PridaLab / LCN-HippoModel

  The LCN-HippoModel is a biophysically realistic model of CA1 pyramidal cells aimed to get novel insights on firing dynamics in deep and superficial populations during the theta rhythm.

  pyramidal-cellsthetatheta-cyclestheta-rhythmfiring-dynamicsintrinsic-propertiessynapticsinhibitory-inputshippocampusevolutionary-modelsself-organizing-mapneuron-simulationsneuron-morphology
  Language:Python 6

• CMU-CBML / NeuronTransportIGA

  This package performs material transport simulation in the complex geometry of neurons using isogeometric analysis (IGA)

  isogeometric-analysisneuron-simulations
  Language:C++ 5

• GazzolaLab / MiV-Simulator

  Bio-physical neural network simulator for Mind-in-Vitro

  electrophysiologyneuron-simulationsneuroscience
  Language:Python 3

• ninadakolekar / mod2nml

  NMODL to NeuroML Language Translator

  neuroscienceneuromlneuron-simulationstranslatorlanguage-translation
  Language:Python 3

• raminmh / SIM-CE

  SIM-CE is an advanced, user-friendly modeling and simulation environment in Simulink, for performing multi-scale behavioral analysis of the nervous system of Caenorhabditis elegans (C. elegans).

  simulatorc-elegansbrain-simulatorneuron-simulationsneural-circuits
  3

• mobeets / psth-to-population

  visualize how individual neuron PSTHs look in population space

  neuroscienceneuron-simulationspsthneural-coding
  Language:HTML 2

• aldomann / neuronsim

  FREs and QIF neurons simulations

  neuroscienceneuron-simulationsr-package
  Language:R 1

• CSDLLab / MPGAN

  Using Simulated Training Data of Voxel-level Generative Model to Improve 3D Neuron Reconstruction

  neuron-simulationsgenerative-adversarial-networkreconstructiontensorflowpython
  Language:Python 1

• csinva / axon-ap-propagation

  Code for simulations of action potential propagation

  action-potentialaxonneuron-simulationsneurosciencesimulation
  Language:AMPL 1

• dansh04 / CA1_Cutsuridis_new

  CA1_Cutsuridis_new, Using Magnesium to simulate impact on Alzheimer's Disease

  alzheimers-diseaseneuron-simulationspython
  Language:Python 1

• jajcayn / interactive-spiking-neuron-model

  Interactive spiking neuron models

  neurosciencemodelingneuroscience-methodsizhikevich-modelneuron-simulationsneuron-simulatorinteractivepython3jupyter-notebook
  Language:Python 1

• takyamamoto / Nonlinear-Dynamics-with-Python

  Python implimentation Nonlinear Dynamics Simulation

  neuron-simulationsnonlinear-dynamics
  Language:Python 1

• vlsi-nanocomputing / Leaky-Integrate-and-Fire-Neuron

  dmidomain-wallslif-neuronneuron-simulationsspintronicsleaky-integrate-and-fire-neuron
  1

• axoaxonic / SpikingNeuronMusic

  Exploring data sonification & generative sound synthesis/sequencing with spiking neuron models

  brian2drum-machinemusicneuron-simulationssequencersnn
  Language:Python 0

• cccohen / Salto

  Salto - automatically generate, explore, and optimize neuron models.

  axonsneuronselectrophysiologymyelinmodellingoptimizationoptimization-algorithmsoptimization-toolsoptimization-methodsoptimization-frameworkneuron-modelneuron-simulatorneuron-simulations
  Language:AMPL 0

• gordonkoehn / nexus

  Investigating the performance of a cross-correlation method of inferring functional connectivity in adaptive-exponential integrate and fire (aEIF) neuron model on small-scale neuronal networks of different activity patterns (synchronous & regular / asynchronous & regular) and topologies (random / scale-free).

  connectivitycorrelationneuron-modelneuron-simulationsneurosciencetopologyconnectivity-inference
  Language:Jupyter Notebook 0

• Jaffar-Hussein / Neurone-Models

  These are models that are used to study the spiking of the neurones organized according to their complexity from just considering the voltage to doing the ADEX model

  brianbrian2matplotlibneuronneuron-modelneuron-simulationsneurosciencepyhon3
  Language:Jupyter Notebook 0

• Kolelab / optimization-tools

  nFit - an application to automatically generate and optimize neuron models.

  neuron-modelsoptimizationmodellingneuronsaxonselectrophysiologymyelinneuron-simulationsneuron-simulatorneuron-modeloptimization-algorithmsoptimization-toolsoptimization-methodsoptimization-framework
  Language:AMPL 0

• likchun / Final-year-project

  Final Year Project, Autumn 2021

  numerical-computationneuron-simulations
  Language:Python 0

• MykolaPerehinets / mozok

  neuroscienceexpert-systemgolangrest-apigoneuron-simulations
  0

• yere1 / Computational_Neuroscience

  Simulation/s and manipulation/s of single neurons and networks in Python and Matlab

  pythonneuron-simulationssimulationneural-networkneuronal-networksingle-cell
  Language:Python 0

• aldomann / neuroscience

  Simulations of the dynamics of neuronal ensembles using the model of FREs and QIF neurons.

  neuroscienceneuron-simulationsmathematical-modellingstudies
  Language:R

• ChaitanyaK77 / Decoding_Neural_Architecture

  custom-neural-network-trainingdeep-learningneuron-simulations
  Language:Jupyter Notebook

• dervinism / thalamocortical1

  Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms: version 1

  absence-epilepsybiophysical-modelingchildhood-absence-epilepsycortexepilepsyhodgkin-huxley-modelneuronneuron-simulationsspike-and-wave-dischargesthalamocorticalthalamuscorticothalamicsleep-waves
  Language:MATLAB

• dervinism / thalamocortical2

  Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms: version 2

  absence-epilepsybiophysical-modelingchildhood-absence-epilepsycortexcorticothalamicepilepsyhodgkin-huxley-modelneuronneuron-simulationssleep-wavesspike-and-wave-dischargesthalamocorticalthalamus
  Language:MATLAB

• Devrim-Celik / icg_trace_reverse_engineering

  Reverse Engineering the Gate Composition given the Voltage Trace of a Gate

  computational-neuroscienceion-channelclusteringneuron-simulations
  Language:Python

• joey-kilgore / Basic_Neuron_Simulations

  Creating Basic Neuron Simulations

  anacondaneuron-simulationsnrn-lib-pythonneuron
  Language:Jupyter Notebook

• royess / CUDAHines

  A CUDA implement of Hines algorithm, which is used in neuron simulators. It is the final project of "Parallel and Distributed Computation" course, taught by Prof. Guojie Luo at PKU.

  cudaneuron-simulationsparallel-computing
  Language:TeX

• russelljjarvis / GENN_On_Jetson

  A Basic Guide for configuring the Nvidia Jetson Nano for running the GENN Potjan et al cortical models developed by Knight et al.

  accessibilityneuron-simulationsneuromorphic-computing