modelling-biological-systems

There are 1 repository under modelling-biological-systems topic.

• RatInABox

  RatInABox-Lab / RatInABox

  A python package for modelling locomotion in complex environments and spatially/velocity selective cell activity.

  continuousephyshippocampuslocomotionmotionneuronsratreinforcement-learningboxgrid-cellsplace-cellsboundary-vector-cellstrajectorycomputational-neurosciencemodellingmodelling-biological-systemsneurosciencesimulationgymgym-environment
  Language:Python 161

• SilverLinings89 / VirusSimulator

  A virus simulation for pandemics based on the SIR-network concept.

  coronaviruscoronavirus-globaloutbreaksir-modelsir-simulationjavascriptmodelling-biological-systemsnumerical-methodsdisease-spread
  Language:TypeScript 10

• Tech-Matt / interacting-cells

  A python simulation in jupyter of a simple biological model

  pythonsimulationcellsmodelmodellingmodelling-biological-systemspython3jupyter-notebookjupytersimulationsenergybiology
  Language:Jupyter Notebook 9

• CiaranWelsh / pycotools

  A Python Toolbox for COPASI

  copasiodemodelling-biological-systemssystems-biologyparameter-estimation
  Language:Jupyter Notebook 7

• falcowinkler / flockingbird

  Flocking algorithm implementation in c++

  flockingemergencesimulationmodelling-biological-systemsboids-simulationboids-algorithmboids-behaviourboidscppcpp11header-only
  Language:C++ 4

• Debbcwing / Sizeb_NPZD

  Size-based NPZD model for understanding phytoplankton community size structure

  modellingmodelling-biological-systemsplanktonsize-based
  Language:Python 3

• InsectRobotics / InvertPy

  Python package of computational models relevant to invertebrate processing, from the environment to sensor responses and to deeper neural responses in the invertebrate brain.

  insectsinsect-eyecomputational-neurosciencemodelling-biological-systemsneural-networksneural-computation
  Language:Python 3

• backmind / autoRICEWQ

  This project aims to be a handler for input creation and running of multiple RICEWQ simulations.

  ricewqmodelling-biological-systemsecotoxicologyrice-cropswaterbalancechemical-engineeringwaterflowagrochemicalricepesticide-transporttransport-modelpythonsimulation
  Language:Python 2

• FunDyn / VirtualCohorts

  Virtual connectomic datasets in Alzheimer's Disease and aging using whole-brain network dynamics modelling by Arbabyazd et al. (2021)

  neuroimagingalzheimers-diseaseagingmodelling-biological-systems
  Language:MATLAB 2

• PieMH / Complex-Adaptive-Systems

  A project for Complex Adaptive Systems' computational models

  complex-systemsemergencemodelling-biological-systemsadaptive-systemssocial-systemants-simulator
  Language:Java 2

• EldhosePoulose / Birth-Death-Process

  modelling-biological-systemsmathematical-modelling
  Language:R 1

• FelixxDP / Ecological-Suicide

  Modelling the phenomenon of "Ecological Suicide", for a final year Master's project in Engineering Mathematics.

  complex-systemsmodelling-biological-systemsodespdesecological-suicide
  Language:Julia 1

• frank0434 / MasterThesis

  Book is published https://frank0434.github.io/MasterThesis/

  apsimxmodelling-biological-systemstargets
  Language:R 1

• robban80 / striatal_SPN_lib

  modelling-frameworkmodelling-biological-systems
  Language:AMPL 1

• AlfyorovaAlyona / Modelling-bio-networks

  Modelling biological networks course at Aalto university

  rpythonmodelling-biological-systems
  Language:HTML