bioatmosphere

UVAFME-VOC

An Individual-based Forest VOC Emission Model built on top of the state-of-the-art Forest Gap Model UVAFME

An_emergent_soil_enzyme_decomposition_model

Source data and code supporting model-based analysis of emergent properties (ECA) of soil enzyme-driven organic matter decomposition

microbiome-drought-legacy

A theorectical investigation into mechanisms of drought legacy formation and influencing factors in soil microbiomes using DEMENTpy.

ABM

Aggregate-based model (ABM) of soil systems comprising soil aggregates as biogeochemical reactors of different sizes

TAM

Taming Fine-root Systems Complexity with TAM(Transport and Absorptive fine roots with Mycorrhizal funig) in ecosystem and biosphere modelling

AlloPart

An Algorithm of Plant Photosynthate Allocation and Partitioning

bioatmosphere

bioatmosphere.github.io

Source code of my blog generated by Hugo

E3SM

Energy Exascale Earth System Model source code. NOTE: use "maint" branches for your work. Head of master is not validated.

microbiome-climate-gradient

Application of DEMENTpy to a climate gradient in Southern California

UVAFMEVOC2017

Scripts and Data underlying the 2017 Ecological Modelling paper on UVAFME-VOC.

Ecosystem-Amnesia

To Accumulate to Innovate

fates

repository for the Functionally Assembled Terrestrial Ecosystem Simulator (FATES)

figure-animation

Create an animated version of static figures in scientific publications

forest-lumping

Lumping trees to model forest ecosystems

Full-House

Generative-Ecosystem

microbial-dormancy

Trait-based understanding of complexity of microbial dormancy and its impacts on organic matter decomposition

microbiome-thermal-extreme

TeMD(Thermal extreme, Microbiome, and Decomposition) with DEMENTpy at Walker Branch Watershed, Oak Ridge, Tennessee

NM-GHGs

Significance of non-microbial processes in organic matter decompositon in ecosystems across scales

OLMT

PDF

Pattern, Diversity, and Process(PDP/F) for demography-based integrative ecosystem modelling