cit-bioinfo

cit-bioinfo

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Location:Paris, France

Home Page:http://cit.ligue-cancer.net/

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cit-bioinfo's repositories

BLCAsubtyping

Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie, TCGA

Language:RLicense:GPL-2.0Stargazers:23Issues:4Issues:2

consensusMIBC

Transcriptomic classifier for Muscle-Invasive Bladder Cancer

Language:RLicense:GPL-2.0Stargazers:13Issues:5Issues:2

mMCP-counter

Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data

Language:RLicense:GPL-3.0Stargazers:9Issues:5Issues:5

MS.liverK

Molecular classification of hepatocellular carcinoma samples

Language:RLicense:GPL-2.0Stargazers:7Issues:2Issues:1

SMAP

SMAP: sequencing patient-derived xenografts

Language:PythonLicense:Apache-2.0Stargazers:4Issues:3Issues:0

WISP

Weighted In Silico Pathology: a novel approach to assess intra-tumoral heterogeneity

Language:RLicense:Apache-2.0Stargazers:4Issues:1Issues:0

BuildConsensus

Building a consensus classification system from series of classification systems

Language:RLicense:GPL-3.0Stargazers:2Issues:3Issues:0

TCGA_PAAD_survival

Survival analysis of gene expression in the curated TCGA pancreatic adenocarcinoma dataset.

Language:RLicense:MITStargazers:0Issues:2Issues:0