dwi

There are 0 repository under dwi topic.

• afni / afni

  Official AFNI source and documentation

  anatomical-mridwifmrifmri-analysisfmri-data-analysismriquality-controlstatistical-inferencestatisticsvisualization
  Language:C 149

• IBT-FMI / SAMRI

  Small Animal Magnetic Resonance Imaging via Python.

  biomedicalfmrifunctional-connectivitydwibidsfslneuroimagingsmall-animalsrodentregistration
  Language:Python 42

• the-virtual-brain / tvb-recon

  Tools for creating full TVB models from individual anatomical scans

  neuroscienceneuroinformaticsmridwiconnectivitysimulation
  Language:Python 32
• GBSS

  arash-n / GBSS

  Gray-matter Based Spatial Statistics

  gbssgray-matternoddimridwimulti-shelldiffusionmicrostructure
  Language:Shell 23

• carpentries-incubator / SDC-BIDS-dMRI

  Introduction to dMRI

  carpentries-incubatorneuroimagingpre-alphalessonbidspythonprogrammingdwidmridiffusion-mridipytractographyfslants
  Language:Jupyter Notebook 20
• PyDesigner

  muscbridge / PyDesigner

  A hands-free DTI, DKI, FBI and FBWM preprocessing pipeline. Information on algorithms and preprocessing steps are available at https://www.biorxiv.org/content/10.1101/2021.10.20.465189v1 A video tutorial on PyDesigner and its usage is now available at https://www.youtube.com/watch?v=mChQFuQqX3k

  dmridmriprepdiffusion-mridiffusion-mapsdwikurtosisdiffusion-preprocessingtractography
  Language:Python 19

• lrq3000 / csg_mri_pipelines

  MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness

  mrifmrifmri-preprocfmri-data-analysisdwidtiregular-expressionspmpythonregexpconnasciiunicode-characters
  Language:Jupyter Notebook 17

• oliverchampion / IVIMNET

  This repository contains the code regarding our publication: Improved unsupervised physics-informed deep learning for intravoxel-incoherent motion modeling and evaluation in pancreatic cancer patients

  deep-learningdiffusion-mridwiivim
  Language:Python 17

• cwatson / mri_library

  Scripts for MRI preprocessing

  mridiffusion-mrihpc-applicationsslurmdwidtibraintractographyneuroimagingpipeline
  Language:Shell 9

• rcruces / MRI_analytic_tools

  Pipelines and tools for MRI analysis

  connectomefreesurferdwi
  Language:HTML 9

• smeisler / fsub_extractor

  Software that functionally segments white matter connections to generate task-specific subcomponents of fiber bundles.

  dwifmriwhite-matter-segmentation
  Language:Python 8

• courtois-neuromod / anat-processing

  Pipeline to process anatomical data, including microstructure metrics from DWI and MT data

  preprocessingworkflowdwianatomical-mri
  Language:Nextflow 5

• anindox8 / 2D-RetinaNet-for-Prostate-Localization-in-mpMRI

  Fully supervised, healthy/malignant prostate detection in multi-parametric MRI (T2W, DWI, ADC), using a modified 2D RetinaNet model for medical object detection, built upon a shallow SEResNet backbone.

  mri-dataprostateprostate-cancert2wdwiadcdeep-learning2d-detectiontensorflow-estimatortensorflow-kerasretinanetseresnetconvolutional-neural-networkssupervised-learning
  Language:Python 3

• christiennedamatac / fixel_based_analysis

  Scripts related to "Longitudinal changes of ADHD symptoms in association with white matter microstructure: A tract-specific fixel-based analysis"

  adhdcognitiondmridwilongitudinal-studiesneurosciencewhite-matterfixel-based-analysis
  Language:Shell 3

• darksim33 / Pyneapple

  Pyneapple is an advanced tool for analysing multi-exponential signal data in MR DWI images.

  dwimrimri-images
  Language:Python 3

• esinkarahan / ATA

  Along Tract Analysis of Diffusion Weighted Images

  dwiskeletonizationvolume-renderingtractographynoddimicrostructurevisualization
  Language:MATLAB 3

• christiennedamatac / tracula

  Scripts related to "White Matter Microstructure in Attention-Deficit/Hyperactivity Disorder: A Systematic Tractography Study in 654 Individuals"

  adhdcognitiondmridwimrineurosciencetractographywhite-mattertracula
  Language:Shell 2

• hbz / to.science.forms

  Rdf and html forms for to.science (Toolbox Open Science). Injected via javascript.

  dwi
  Language:JavaScript 2

• stijnimaging / UTAP_WP1

  Processing UHF MRI :brain: data

  mridwit2
  Language:Shell 2

• TylerSpears / fenri

  FENRI (Fiber Orientations from Explicit Neural Representations) Implementation Repository

  deep-learningdiffusion-mridmridwiimplicit-neural-representationmachine-learningmripythonpytorchsuper-resolutiontractography
  Language:Jupyter Notebook 2

• alexpron / article_central_sulcus_connectivity

  Code used for study design, MRI data processing, statistical analysis and figures in the article U-shape short-range extrinsic connectivity organisation around the human central sulcus

  dwimriconnectivityu-fibresbrain
  Language:Python 1

• anamatoso / fixel-based-analysis

  Perform fixel based analysis on DWI data

  dwifixelmri
  Language:Python 1

• c-tous / cardiac-diffusion-MRI

  cDWI, cDTI, cardiacDTI, design of DWI sequences (SE, STEAM, TRSE), gradient sampling shells, processing helix angle (HA), sheet angle (E2A, SA), transverse angle (TA)

  cardiacdticdticdwidiffusiondiffusion-tensor-imagingheartmyocardiummri-sequencessequence-designhelix-anglesheet-angletransverse-anglecongenital-heart-diseasedwimrishellnumericalphantomsynthetic
  Language:Mathematica 1

• christiennedamatac / longitudinal_tract_based_spatial_statistics

  Scripts related to "Associations between attention-deficit hyperactivity disorder (ADHD) symptom remission and white matter microstructure: A longitudinal analysis"

  adhddwilongitudinal-analysismritbsswhite-mattercognitiondmrineuroscience
  Language:Shell 1

• hbz / to.science

  to.science - Toolbox Open Science. Dokumentation und Installation

  dwi
  Language:Shell 1

• hbz / zbmed-drupal-theme

  zbmde/FRL theme for drupal

  drupalthemedwi
  Language:HTML 1

• ntnu-mr-cancer / T2-DWI

  Fitting of three diffusion models to data acquired using combined T2-DWI.

  mrimri-imagesprostateprostate-cancerdiffusiondwiadct2echo-timediffusion-componentst2-dwi
  Language:MATLAB 1

• pni-lab / PUMI

  PUMI: neuroimaging Pipelines Using Modular workflow Integration

  dwineuroimagingnipypepreprocessingresting-state-fmri
  Language:Python 1

• hbz / orca.resources

  dwiorca
  0

• pni-data / CAP_MRI

  Dataset for capsaicin MRI project

  dwitfmrianatsfb1280
  0

• pni-data / TRR289_A02

  Project A02 - PI: Christian Büchel (Universität Hamburg)

  bidsdwirsfmrit1trr289
  0

• pni-data / TRR289_MEGA

  TRR289 Mega-dataset

  trr289bidst1dwirsfmribids-mega
  0

• ViRoLam / DWI_artefact

  Diffusion Weighted Imaging (DWI) line artifact removal

  applicationartefactdwifmrifmri-data-analysisfmri-image-slicespythonpython3
  Language:Python 0

• christiennedamatac / sps_decision-making_dwi

  Scripts related to "Exploring the relationships between sensory processing sensitivity, decision-making, and brain white matter microstructure"

  decision-makingdiffusion-weighted-imagingdwienvironmental-sensitivitysensory-processing-sensitivityspseconomic-preferenceswhite-matter-microstructure
  Language:R

• gabridele / dwi-preprocessing

  This is a jupyter notebook with all the basic and necessary steps for dwi preprocessing with CSD. This is basically a transcript/notebook version of Dr. Andrew Jahn's YouTube tutorials (https://youtube.com/playlist?list=PLIQIswOrUH68Zi9SVDAdcUExpq2i6A2eD&feature=shared).

  csddwipreprocessing-pipeline
  Language:Jupyter Notebook

• hbz / pdfAConverter

  A restful API for Callas PDFA pilot - the Pilot isn't included ;-)

  dwi
  Language:Java