sequence-design

There are 0 repository under sequence-design topic.

• Edinburgh-Genome-Foundry / DnaChisel

  :pencil2: A versatile DNA sequence optimizer

  bioinformaticscodon-optimizationdna-optimizationsequence-designsynbiosynthetic-biology
  Language:Python 216

• Edinburgh-Genome-Foundry / Caravagene

  🎨 Python library to plot multi-part genetic constructs

  synthetic-biologymolecular-biologysequence-designdna-assembly
  Language:Python 24

• Edinburgh-Genome-Foundry / CUBA

  🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software

  vuejsdjangosynthetic-biologydna-assemblysequence-designdocker-composeweb-development
  Language:Vue 19

• Edinburgh-Genome-Foundry / SnapGeneReader

  👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

  synthetic-biologysequence-designconvertergenbankbiopythonsnapgene
  Language:Python 18

• Edinburgh-Genome-Foundry / genedom

  Batch domestication of genetic parts with Python

  synbiosynthetic-biologysequence-designdna-assemblypart-domestication
  Language:Python 15

• Edinburgh-Genome-Foundry / SBOL-Visual-CSS

  :curly_loop: Draw genetic elements with HTML & CSS

  synthetic-biologyuser-interfacecsssequence-design
  Language:HTML 15

• Edinburgh-Genome-Foundry / GoldenHinges

  :link: Short overhangs design for DNA assembly

  synthetic-biologydna-assemblysequence-design
  Language:Python 11

• Edinburgh-Genome-Foundry / kappagate

  :crystal_ball: Predict DNA assembly clone validity rates - powered by Kappa

  synthetic-biologydna-assemblylab-automationsequence-designkappa-languagebiological-simulations
  Language:Python 9

• Edinburgh-Genome-Foundry / zymp

  :scissors: Design compact restriction sites arrays (python utility)

  dna-assemblysequence-designrestriction-sitessynthetic-biology
  Language:Python 9

• fryzjergda / DesiRNA

  State of the art software for RNA sequence design. The first to solve the Eterna benchmark!

  bioinformaticsbioinformatics-tooleternarnascientific-computingsecondary-structuresequence-designsimulation-modeling
  Language:Python 6

• c-tous / cardiac-diffusion-MRI

  cDWI, cDTI, cardiacDTI, design of DWI sequences (SE, STEAM, TRSE), gradient sampling shells, processing helix angle (HA), sheet angle (E2A, SA), transverse angle (TA)

  cardiacdticdticdwidiffusiondiffusion-tensor-imagingheartmyocardiummri-sequencessequence-designhelix-anglesheet-angletransverse-anglecongenital-heart-diseasedwimrishellnumericalphantomsynthetic
  Language:Mathematica 1

• soochem / ai-dna-primer-design

  Public code for AI-based DNA primer design using auto-encoder, convolutional neural network and Cox regression model.

  sequence-design
  Language:Python 0