Alexandre Pron's repositories
article_central_sulcus_connectivity
Code used for study design, MRI data processing, statistical analysis and figures in the article U-shape short-range extrinsic connectivity organisation around the human central sulcus
academic-kickstart
đź“ť Easily create a beautiful website using Academic, Hugo, and Netlify
alexpron.github.io
Personal website
CortexODE
The official implementation of CortexODE
datalad-ukbiobank
Resources for working with UKBiobank as a DataLad dataset
dhcp-dl-neonatal
The dHCP deep learning-based neonatal structural MRI processing pipeline.
dhcp-structural-pipeline
structural analysis of neonatal brain MRI scans
slam
Surface anaLysis And Modeling
datalad-xnat
Track XNAT projects with DataLad
ds_prep
All the scripts to prepare the Courtois-Neuromod dataset
fetpype
Pipeline for processing MRI acquired in vivo in Human fetus
free-for-dev
A list of SaaS, PaaS and IaaS offerings that have free tiers of interest to devops and infradev
heudiconv
A flexible DICOM converter for organizing brain imaging data into structured directory layouts
lectures-labs
Slides and Jupyter notebooks for the Deep Learning lectures at M2 Data Science Université Paris Saclay
narps_open_pipelines
A codebase reproducing the 70 pipelines of the NARPS study (Botvinik-Nezer et al., 2020) shared as an open resource for the community.
NiftyMIC
NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.
nisnap
Display segmentation results over MRI scans in Jupyter notebooks.
reproducibility
Resources on reproducibility (in neuroimaging)
shanoir-ng
Shanoir-NG (SHAring iN vivO Imaging Resources - Next Generation)
shanoir_downloader
Scripts to download, check and anonymize datasets
slamviz
Neuroanatomical Surfaces Visualization