Steven Meisler's repositories
fsub_extractor
Software that functionally segments white matter connections to generate task-specific subcomponents of fiber bundles.
Meisler_Reading_FBA
Code used in the Meisler and Gabrieli 2022 eLife paper on fixel based analyses of reading abilities.
smeisler.github.io
🎓🏫 Steven Meisler's website, originally forked from mmistakes/minimal-mistakes
Awesome-CV
:page_facing_up: Awesome CV is LaTeX template for your outstanding job application
BayesfMRI
BayesfMRI R package
bids-specification
Brain Imaging Data Structure (BIDS) Specification
ciftiTools
ciftiTools R package
ConFixel
Convert Fixels back and forth from h5 files!
Dcm2Bids
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
fitlins
Fit Linear Models to BIDS Datasets
fmriprep
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
hcp2bids
To convert Human Connectome projects(HCP) data to BIDS std
markdown
A Python implementation of John Gruber’s Markdown with Extension support.
Meisler_ReadingFA_Associations
Code used in Meisler and Gabrieli 2022
Meisler_ReadingInt_DWI
Code used in the Meisler, Gabrieli, and Christodoulou 202X paper on DWI correlates of reading intervention.
freesurfer_tabulate
Gathering/Creating annot files and using them to get tsvs
google-scholar-for-github-pages
This is a Jekyll include file that pulls from a Google Scholar csv file to output and format your publications
ModelArray
ModelArray: a memory-efficient R package for statistical analysis of fixel data (modified for surface-based morphometry)
moderncv
A modern curriculum vitae class for LaTeX
nilearn
OHBM work space
PyMVPA
runs MVPA and RSA analysis BIDS bold derivative data
qsiprep
Preprocessing and reconstruction of diffusion MRI
sdcflows
Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
smeisler
Config files for my GitHub profile.
smriprep
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
SynBOLD-DisCo
Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
synthstrip
Synthstrip integration to be used across nipreps
xcp_abcd
post processing of fmriprep , nibabies, hcp and dcan,
xcpEngine
Official public repository for the XCP Engine