There are 3 repositories under utrecht-university topic.
A powerful and modular toolkit for record linkage and duplicate detection in Python
A dependency-free cross-platform swiss army knife for PDB files.
Numbers concerning COVID-19 disease cases in The Netherlands by RIVM, LCPS, NICE, ECML, and Rijksoverheid.
Graph Network for protein-protein interface
Predict the binding affinity of protein-protein complexes from structural data
Official repo of the modular BioExcel version of HADDOCK
One downloader for many scientific data and code repositories! DOI :open_hands: Data
SYNERGY - Open machine learning dataset on study selection in systematic reviews
A curated list of awesome open source projects from Utrecht University.
Set of useful HADDOCK utility scripts
A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.
This is a library of latex classes for creating documents according to the Utrecht University style guide.
Workflow generator for simulation studies using the command line interface of ASReview LAB
Tools such as plots and metrics to analyze (simulated) reviews for ASReview LAB
Extension that adds Covid-19 related datasets to ASReview
Game and Media Technology MSc at Utrecht University (2020)
Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
Graph Network for protein-protein interface including language model features
FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
Z-stack Depth Colorcode ImageJ FIJI plugin
Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
Material to run the HADDOCK antibody-antigen modelling protocol
R Cafe community event Utrecht University
Tool to preprocess datasets for ASReview
A curated list of awesome Citizen Science Projects in the Netherlands
Ricgraph - Research in context graph
The GeoNewsMiner (GNM): An interactive spatial humanities tool to visualize geographical references in historical newspapers
ASReview extension to generate wordcloud from data files.
Enrich sf data with geographic features from OpenStreetMaps.
Getting started with GitHub @UtrechtUniversity
Detection of Molecules plugin for ImageJ, Utrecht University
Webpage of the Bonvinlab @ Utrecht University and HADDOCK software
Make your research data and code FAIR with the UU FAIR Cheatsheets!
This is a Utrecht University dissertation template for LaTeX