fair-data

There are 2 repositories under fair-data topic.

• ComPlat / chemotion_ELN

  Electronic Lab Notebook

  elnfair-datardmsmart-lab
  Language:JavaScript 118

• FAIRDataTeam / FAIRDataPoint

  metadatafair-datadata-repository
  Language:Java 58

• abdenlab / oxbow

  Read specialized NGS formats as data frames in R, Python, and more.

  apache-arrowbioinformaticsdata-sciencedataframefair-datagenomicsmultiomicsngspandaspolarspythonrrust-lang
  Language:Rust 48

• Bayer-Group / COLID-Documentation

  The documentation repository is part of the Corporate Linked Data Catalog - short: COLID - application.

  coliddata-cataloguedata-cataloglinked-datardfshaclfairfair-datafindableelasticsearchtriplestorecloud-native
  Language:HTML 43

• linkml / schemasheets

  Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats

  linkmlschemasspreadsheetsfair-datashape-languagesshaclshexsheets2linkmlmetadata
  Language:Python 38

• LibraryCarpentry / Top-10-FAIR

  Top 10 FAIR Data & Software Things

  code4libfair-datafair-principlesfair-softwarelibrary-carpentryresearch-software-engineering
  Language:TeX 32

• UVA-DSI / Open-Data-Lab

  an initiative to provide infrastructure for reproducible workflows around open data

  opendataopen-dataopen-researchopen-research-dataopen-research-experimentsworkflowsopenscienceopen-sciencedatasciencedata-sciencediscoverabilityfair-datafair-principlesreproducibilityopen-educationreference-data
  Language:Jupyter Notebook 27

• microbiomedata / nmdc-schema

  National Microbiome Data Collaborative (NMDC) unified data model

  nmdcmicrobiomestandardslinkmlgenomicsproteomicsmetabolomicstranscriptomicsschemamicrobiomedatasamplesmetadatamixsecoinformaticsfair-data
  Language:Python 26
• chromConverter

  ethanbass / chromConverter

  Parsers for chromatography data in R (HPLC-DAD/UV, GC-FID, MS)

  chromatographyr-packagehplchplc-dadhplc-uvcheminformaticsmetabolomicsmetabolomics-dataopen-sciencegc-fidrrstatsopen-datafair-data
  Language:R 23

• fair-data / fairdatapoint

  Provide machine-readable descriptions of your data assets

  dataset-interfacedcatdcmifair-datametadatardfrestful-api
  Language:Python 21

• fair-workflows / nanopub

  Python client for searching, publishing and modifying nanopublications.

  nanopublicationsfair-datardfrdflib
  Language:Python 20

• ChrKoenig / Big_Data_Ecology

  Materials for the Workshop "Big Data Ecology"

  best-practicesdata-life-cyclefair-datadatabasesspatial-dataversion-controlperformancegbifworkshop-materialsr
  Language:R 18

• FAIR-Data-EG / consultation

  A call for contributions to the report of the FAIR Data Expert Group

  fair-datadataresearch-policyscience-policyresearch-dataresearch-data-managementresearch-data-life-cycle-managementdata-management-planh2020horizon2020
  16

• jesserobertson / earthchem-pyclient

  Python client for the Earthchem REST and OGC APIs

  geologygeochemistryopen-dataopen-scienceopen-sourcefair-data
  Language:Python 16

• Bayer-Group / COLID-Setup

  The setup repository is part of the Corporate Linked Data Catalog - short: COLID - application. It helps setting up a local environment based on Docker Compose.

  coliddata-catalogdata-cataloguelinked-datardfshaclfairfair-datafindableelasticsearchtriplestorecloud-native
  Language:Shell 15

• PyEllips / pyElli

  An open source ellipsometry analysis tool for reproducible and comprehensible building of optical models.

  ellipsometryberreman4x4transfer-matrix-methodsolversimulationpythonfair-datanexusformat
  Language:Jupyter Notebook 15

• FAIRDataTeam / FAIRifier

  A tool to make data FAIR

  fair-datalinked-datadtls
  Language:Java 14

• FAIRDataTeam / OpenRefine-metadata-extension

  Extension for OpenRefine to support FAIR metadata

  openrefinemetadatafair-datafair-principlesfairnessmetadata-editorgo-fairdockeropen-source
  Language:Java 14

• ComPlat / chemotion_REPO

  Repository for samples, reactions and related research data

  data-repositoryfair-datardmrepositorynfdi4chem
  Language:JavaScript 12

• ejp-rd-vp / CDE-semantic-model

  Semantic data model of the set of common data elements for rare disease registration

  common-data-elementsfairfair-datarare-diseaserdf-modelrdf-schema
  12

• UtrechtUniversity / FAIR-Cheatsheets

  Make your research data and code FAIR with the UU FAIR Cheatsheets!

  accessibilityfair-datafair-principlesfair-softwarefindabilityinteroperabilityresearch-dataresearch-data-managementresearch-softwarereusabilitytransparencyutrecht-universityresearch-software-management
  12

• NCBI-Hackathons / The-Broad-Institute-Single-Cell-RNA-Seq-Data-Set

  Visualize cancer genomes with FAIR single-cell RNA-seq data

  fair-datasingle-cell-genomicscancer-genomicschromosome-abberations
  Language:Python 11

• UB-Mannheim / awesome-RDM

  A curated list of awesome RDM resources for researchers and organisations

  fdmfdzrdmresearch-data-managementdata-managementdata-management-planfairfair-datafair-principlesresearchresearch-data
  11

• nfdi4plants / ARCtrl

  Library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtime-agnostic contract systems.

  fair-datafsharpisardmarcfable-libraries
  Language:F# 10

• TIBHannover / 2018-07-09-FAIR-Data-and-Software

  Website of our Carpentries-based workshop from July 2018 (former contact: @katrinleinweber)

  fair-datasustainable-softwarefair-principlesresearch-data-managementhannoverworkshop-websiteresearch-software-engineeringtibfds
  Language:Python 10

• Bayer-Group / COLID-Data-Marketplace-Frontend

  The Data Marketplace frontend repository is part of the Corporate Linked Data Catalog - short: COLID - application. Users can search for registered resources in COLID. It provides a search bar, aggregation filters and search result displaying including term highlighting.

  cloud-nativecoliddata-catalogdata-catalogueelasticsearchfairfair-datafindablelinked-datardfshacltriplestore
  Language:TypeScript 9

• co-cddo / ukgov-metadata-exchange-model

  A metadata model for describing data assets for exchanging between UK government organisations.

  datasetdcatfair-data
  Language:Makefile 9

• FAIR4HEP / cookiecutter4fair

  A logical, standardized, but flexible project structure for sharing AI and data science work following FAIR principles.

  artificial-intelligencecookiecutterfair-datamachine-learningparticle-physics
  Language:Python 8

• FAIRplus / Data-Maturity

  FAIR Dataset Maturity model

  biomedical-data-sciencefairfair-datalifesciencematurity-model
  Language:SCSS 8

• henrietteharmse / uml2semantics

  Translates UML class diagrams to OWL2

  conceptual-modelconceptual-modellingfair-dataknowledge-graphknowledge-representationknowledge-representation-reasoninglogical-consistencyontologiesowl2umluml-class-diagramvalidation
  Language:Scala 7

• MaastrichtU-IDS / fair-test

  ☑️ A library to build and deploy FAIR metrics tests APIs that can be used by FAIR evaluation services supporting the FAIRMetrics specifications, such as FAIR enough and the FAIR evaluator.

  fair-datafair-principlestesting-library
  Language:Python 7

• Bayer-Group / COLID-Editor-Frontend

  The editor frontend repository is part of the Corporate Linked Data Catalog - short: COLID - application. It offers user an metadata based user interface to register resources in COLID.

  coliddata-catalogdata-cataloguelinked-datardfshaclfairfair-datafindableelasticsearchtriplestorecloud-native
  Language:TypeScript 6

• MaastrichtU-Library / the-FAIR-extension

  🧩 The FAIR extension: A web browser extension to evaluate Digital Object FAIRness

  chrome-extensionfair-datafair-digital-objects
  Language:JavaScript 6

• zenodraft / zenodraft

  CLI to manage depositions on Zenodo or Zenodo Sandbox.

  zenodozenodo-sandboxdraft-depositiondeposition-metadataclinodejsupload-fileuploaderfairfair-datafair-softwarefairnesszenodo-upload
  Language:TypeScript 6

• ess-dive-community / essdive-uas

  READY TO USE. A reporting format for Unoccupied Aerial System (UAS) data and metadata for the ESS-DIVE data repository

  uasmetadataformatfair-data
  5

• sdsc-ordes / gimie

  Extract linked metadata from repositories

  clifair-datagitlibrarylinked-open-datametadata-extractionscientific-software
  Language:Python 5