nci-itcr

There are 1 repository under nci-itcr topic.

Viewers
OHIF / Viewers
OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages
nci-itcr nci-qin quantitative-imaging imaging-informatics cancer-imaging-research dicom image-analysis medical-image-processing medical-imaging reactjs javascript hacktoberfest dicom-viewer medical
Language:TypeScript 2953
cornerstonejs / cornerstone
JavaScript library to display interactive medical images including but not limited to DICOM
javascript cornerstone dicom medical-imaging nci-itcr
Language:JavaScript 2019
AIM-Harvard / pyradiomics
Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics
radiomics cancer-imaging-research medical-imaging computational-imaging nci-qin tcia-dac python radiomics-features docker nci-itcr radiomics-feature-extraction feature-extraction ibsi
Language:Jupyter Notebook 1089
cornerstonejs / dicomParser
JavaScript parser for DICOM Part 10 data
dicom javascript nci-itcr
Language:JavaScript 696
cornerstonejs / cornerstoneTools
A framework for tools built on top of Cornerstone.
cornerstone dicom medical-imaging javascript nci-itcr hacktoberfest
Language:JavaScript 574
cornerstonejs / cornerstone3D
Cornerstone is a set of JavaScript libraries that can be used to build web-based medical imaging applications. It provides a framework to build radiology applications such as the OHIF Viewer.
javascript nci-itcr cornerstone medical-imaging segmentation
Language:TypeScript 454
dcmjs-org / dcmjs
Javascript implementation of DICOM manipulation
javascript dicom medical-imaging nci-itcr
Language:JavaScript 284
cornerstonejs / cornerstoneWADOImageLoader
[DEPRECATED] DICOM WADO Image Loader for the cornerstone library
cornerstone javascript dicom wado cornerstone-image-loader nci-itcr
Language:JavaScript 280
QIICR / dcmqi
dcmqi (DICOM for Quantitative Imaging) is a free, open source C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results
quantitative-imaging dicom imaging-informatics converters cancer-imaging-research medical-image-computing nci-qin tcia-dac nci-itcr 3d-slicer-extension 3d-slicer
Language:C++ 224
CBICA / CaPTk
Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
cancer-imaging-research radiomics radiomics-features machine-learning cpp cpp11 u24 itcr nci nci-itcr nih medical-image-processing cancer cbica image-analysis analytics cwl cwltool medical-image-computing medical-imaging
Language:C++ 172
OHIF / react-vtkjs-viewport
VTK.js image viewport component in React
nci-itcr nci-qin react component-library
Language:JavaScript 143
dcmjs-org / dicomweb-client
JavaScript client for DICOMweb RESTful services
dicomweb dicom npm javascript http nci-itcr imaging-informatics dicom-json
Language:JavaScript 133
AIM-Harvard / SlicerRadiomics
A Slicer extension to provide a GUI around pyradiomics
3d-slicer nciitcr quantitative-imaging nci-itcr radiomics cancer imaging clinical-research
Language:Python 100
cornerstonejs / react-cornerstone-viewport
Cornerstone medical image viewport component for React
nci-itcr javascript cornerstone dicom medical-imaging react
Language:JavaScript 96
dcmjs-org / dicomweb-server
Lightweight DICOMweb Server with CouchDB
couchdb lightweight-dicomweb-server dicomweb-server-js dicom dicomweb javascript dicomweb-client nci-qin nci-itcr
Language:JavaScript 94
OHIF / react-viewerbase
Core medical image viewer components built using React
nci-itcr nci-qin imaging-informatics dicom react cornerstone ohif
Language:JavaScript 86
cornerstonejs / cornerstoneWebImageLoader
Cornerstone Image Loader for Web Images (PNG, JPEG)
cornerstone javascript cornerstone-image-loader nci-itcr
Language:JavaScript 69
waldronlab / MultiAssayExperiment
Bioconductor package for management of multi-assay data
bioconductor r tcga genomics nci-itcr bioconductor-package
Language:R 67
cornerstonejs / cornerstoneMath
Math and computation geometry functionality for cornerstone
cornerstone medical-imaging javascript nci-itcr
Language:JavaScript 50
griffithlab / civic-client
Web client for CIViC: Clinical Interpretations of Variants in Cancer
nci-itcr civic javascript front-end-framework cancer cancer-genomics variants
Language:JavaScript 50
griffithlab / civic-server
Backend Server for CIViC Project
nci-itcr ruby civic backend-server cancer cancer-genomics variants
Language:HTML 39
OHIF / VTKPlugin
OHIF Plugin for The Visualization Toolkit (VTK)
nci-itcr nci-qin quantitative-imaging imaging-informatics image-analysis medical-image-processing ohif-plugin
Language:JavaScript 35
crowds-cure / cancer
Crowd-sourcing annotations of medical images to advance cancer research
nci-itcr imaging-informatics dicomweb
Language:JavaScript 25
OHIF / ohif-core
Useful functions and classes for building web-based medical imaging applications
nci-itcr nci-qin
Language:JavaScript 25
QIICR / QuantitativeReporting
Segmentation-based measurements with DICOM import and export of the results.
nciitcr nci-qin quantitative-imaging nci-itcr dicom medical-image-computing 3d-slicer-extension
Language:Python 21
civic-v2
griffithlab / civic-v2
CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer
cancer cancer-genomics nci-itcr variants variant-curation biocuration
Language:TypeScript 19
cornerstonejs / calculate-suv
Tiny library for calculating Standardized Uptake Value for Nuclear Medicine (i.e. PET, SPECT)
dicom nci-itcr dcmjs cornerstone
Language:TypeScript 17
MD-Anderson-Bioinformatics / NG-CHM
A dynamic, graphical environment for exploration of clustered or non-clustered heat map data in a web browser.
ng-chm heatmap nci-itcr
Language:JavaScript 10
shwetagopaul92 / restfulSE
demonstration of SummarizedExperiment with assay component retrieved from remote HDF5 server
nci-itcr bioconductor-package
Language:R 9
vjcitn / BiocOncoTK
Bioconductor components for general cancer genomics
nci-itcr
Language:R 9
vjcitn / ontoProcPRE2021
Ontology processing for Bioconductor
nci-itcr bioconductor-package humancellatlas
Language:R 9
MD-Anderson-Bioinformatics / NGCHM-R
An R library for creating Next-Generation Clustered Heat Maps (NG-CHM)
ng-chm heatmap nci-itcr
Language:R 7
QIICR / SlicerDevelopmentToolbox
API for 3D Slicer extension development providing widgets, mixins, helpers, decorators etc.
slicer widgets mixins decorators events helpers development nci-itcr 3d-slicer-extension
Language:Python 7
QIICR / dicom4miccai-handson
Supporting materials for the MICCAI 2017 DICOM tutorial. See accompanying documentation at https://qiicr.gitbook.io/dicom4miccai-handson/
nci-itcr dicom handson tutorial nci-qin
Language:Jupyter Notebook 5
SBU-BMI / SlicerPathology
3D Slicer extension for Pathology segmentation tools
nci-itcr
Language:C++ 5
vjcitn / pogos
PharmacOGenomics Ontology Support
nci-itcr bioconductor-package
Language:R 3

nci-itcr

OHIF / Viewers

cornerstonejs / cornerstone

AIM-Harvard / pyradiomics

cornerstonejs / dicomParser

cornerstonejs / cornerstoneTools

cornerstonejs / cornerstone3D

dcmjs-org / dcmjs

cornerstonejs / cornerstoneWADOImageLoader

QIICR / dcmqi

CBICA / CaPTk

OHIF / react-vtkjs-viewport

dcmjs-org / dicomweb-client

AIM-Harvard / SlicerRadiomics

cornerstonejs / react-cornerstone-viewport

dcmjs-org / dicomweb-server

OHIF / react-viewerbase

cornerstonejs / cornerstoneWebImageLoader

waldronlab / MultiAssayExperiment

cornerstonejs / cornerstoneMath

griffithlab / civic-client

griffithlab / civic-server

OHIF / VTKPlugin

crowds-cure / cancer

OHIF / ohif-core

QIICR / QuantitativeReporting

griffithlab / civic-v2

cornerstonejs / calculate-suv

MD-Anderson-Bioinformatics / NG-CHM

shwetagopaul92 / restfulSE

vjcitn / BiocOncoTK

vjcitn / ontoProcPRE2021

MD-Anderson-Bioinformatics / NGCHM-R

QIICR / SlicerDevelopmentToolbox

QIICR / dicom4miccai-handson

SBU-BMI / SlicerPathology

vjcitn / pogos