Vince Carey's repositories
biocBiocypher
Exploratory interfaces from Bioconductor to Biocypher
gwasCatSearch
test
AnVILBestPractices
Bioconductor practices recommended for working with NHGRI AnVIL
BiocAssets
Overview of container and binary production processes
BiocGF
interface to geneformer
BiocMatQuant
Assessing diverse matrix representations and operations in Bioconductor applications
BiocMIMB
Methods in Molec Biol/Cancer Bioinfo article
bioconductor.org
Source code for the Bioconductor website
BiocSklearn
track bioc package
BiocSpatialDemos
Explore selected datasets in spatial genomics
biocSuppAPI
interrogate the API of support.bioconductor.org
BioDIGSData
Data Package for BioDIGS Project
diamonds24
CSAMA 2024 shiny dev project
gwasCatSearchPREAUG24
tooling for semantic search of NHGRI GWAS catalog
ontologies
repository for protege-generated ontologies
ontoProcWS
Materials for Bioc2024 workshop on ontology analysis with ontoProc
osca4anvil
simple support for OSCA in AnVIL for Bioc 3.14
phecopack
Support for computing with Phecodes
RAIDS4AnVIL
Support for RAIDS in AnVIL (prototypical)
Rdisop
This is the git repository matching the Bioconductor package Rdisop: Decomposition of Isotopic Patterns
scecotalk
quarto for a talk on single cell analysis ecosystems
tatami
C++ API for various matrix types.
vjc-build-binaries
walkthrough
XenSCE
sketch of S4 methods for Xenium demonstration data in Open Storage Network
zero-shot-scfoundation
envs need updating