nih

There are 1 repository under nih topic.

Slicer / Slicer
Multi-platform, free open source software for visualization and image computing.
medical-imaging vtk itk python qt image-processing national-institutes-of-health medical-image-computing neuroimaging tractography image-guided-therapy registration segmentation 3d-printing nih 3d-slicer tcia-dac kitware c-plus-plus computed-tomography
Language:C++ 1474
Slicer / SlicerGitSVNArchive
:warning: OBSOLETE | Multi-platform, free open source software for visualization and image computing.
medical-imaging vtk itk python qt image-processing national-institutes-of-health cross-platform medical-image-computing neuroimaging tractography image-guided-therapy registration segmentation 3d-printing nih 3d-slicer tcia-dac kitware c-plus-plus
Language:C++ 874
CheXNet-with-localization
thtang / CheXNet-with-localization
Weakly Supervised Learning for Findings Detection in Medical Images
chexnet densenet nih chest-xray-images chestxray14 weakly-supervised-learning pytorch bounding-boxes medical-imaging chest-x-ray8 deep-learning
Language:Python 313
CBICA / CaPTk
Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
cancer-imaging-research radiomics radiomics-features machine-learning cpp cpp11 u24 itcr nci nci-itcr nih medical-image-processing cancer cbica image-analysis analytics cwl cwltool medical-image-computing medical-imaging
Language:C++ 169
gregwchase / nih-chest-xray
Identifying diseases in chest X-rays using convolutional neural networks
convolutional-neural-networks chest-xrays h2o nih deep-learning keras mxnet chestxray14
Language:Jupyter Notebook 88
Slicer / ExtensionsIndex
Slicer extensions index
3d-slicer 3d-slicer-extension cross-platform image-processing medical-image-computing medical-imaging national-institutes-of-health neuroimaging nih python qt registration segmentation vtk
Language:Python 57
BrainMaGe
CBICA / BrainMaGe
Brain extraction in presence of abnormalities, using single and multiple MRI modalities
pytorch pytorch-lightning python neuroimaging brain-extraction nih deep-learning machine-learning skull-stripping segmentation
Language:Python 29
YeongHyeon / Lung_Extraction_from_CXR
Lung Extraction from Chest X-ray for Efficient Computing
lung extraction efficient computing deep-learning residual-networks nih
Language:Python 14
novasmedley / f31-templates
Latex templates for submitting the NIH F31 grant
latex nih latex-templates grant-proposals
Language:TeX 12
rnabioco / nihexporter
An R data package for NIH EXPORTER data
nih spending
Language:R 12
arundasan91 / Macular-Degeneration
Age-Related Macular Degeneration (AMD) Research using AREDS dataset provided by National Institute of Health (NIH).
nih areds-dataset macular-degeneration deep-learning
Language:Python 11
christopherBelter / nih_reporter_api
R code to work with the NIH RePORTER API
r api nih reporter
Language:R 10
burkesquires / Build-a-Reproducible-Jupyter-Workflow-From-Scratch
Build a Reproducible Jupyter Workflow From Scratch (2017 NIH Hour of Code)
hour-of-code jupyter-notebook jupyter python python3 anaconda-distribution bioconda bioinformatics nih niaid workflow
Language:Jupyter Notebook 8
corybrunson / NIH-proposal-template
A Markdown–Pandoc template for NIH grant proposals
nih markdown-template pandoc-template grant-proposal
Language:TeX 8
hydra-billing / hyaml
Expression-oriented language with Python backend
antlr config grammar language nih python yaml
Language:Python 5
aceat64 / ppe-donations
DFW PPE: Dallas-area initiative to build PPE
ppe coronavirus donation-drop sewn-ties visors headband face-shields nih 3d-printers headbands-printed
4
andrewallenbruce / codexchain
Access Medical Coding APIs :package:
healthcare icd-10-cm medical-coding rstats hcpcs nih nlm medlineplus r
Language:R 4
MOSAICS-NIH / MOSAICS
A collection of tools for characterizing membrane structure and dynamics within simulated trajectories of molecular systems.
biophysics dynamics grid lattice lipids membrane mosaics simulations structure nih
Language:C++ 4
seandavi / ClinicalTrialsAPI
Access the NIH ClinicalTrials.gov REST API
api-client r rstats clinical-trials nci nih bioinformatics informatics data-mining
Language:R 4
jermwatt / pynih
A Python interface for NIH Reporter APIs
api fund funding nih publications python python3 healthcare-data research-tool
Language:Jupyter Notebook 3
National-COVID-Cohort-Collaborative / short-course-2022-june
Educational material for the N3C short course, June 2022. (All assignments are contained in the secure Enclave.)
covid n3c ncats nih
3
nih-sparc / data-portal
Source code for NIH SPARC Data Portal
nih datascience
Language:Vue 3
aofarrel / SRANWRP
Wraps up some SRA-related utilities
bioinformatics nih sra wdl
Language:WDL 2
kevinmastascusa / NIHDataFetcher
"NIHDataFetcher" is a GitHub repository with scripts for accessing and fetching data from various NIH databases like GEO and PubMed. It provides code examples to retrieve GEO datasets, search PubMed, and load ClinVar data. Ideal for researchers and data scientists working with biomedical information.
biomedical clinvar data-science informatics nih pubmed
Language:Python 2
lab-rasool / MINDS
🧠 | Multimodal Integration of Oncology Data System
cancer data deep-learning gdc-portal machine-learning nih oncology multimodal
Language:JavaScript 2
liuziwei7 / nih-funding-visualization
NIH Funding Visualization
hci informatics nih visualization
Language:Matlab 2
National-COVID-Cohort-Collaborative / short-course-2024-january
Educational material for the N3C short course, January 2024. (All assignments are contained in the secure Enclave.)
covid n3c ncats nih
Language:R 2
usmannazir / ChestX
ChestX pre-trained model
chestxray14 pretrained-models nih
Language:Jupyter Notebook 2
Aculeasis / docker-starter
Скрипт для управления docker-контейнерами.
nih docker python3 nih-syndrome
Language:Python 1
sra-collector
arcones / sra-collector
Collect NIH NCBI SRA metadata of several GEO studies in one search
bioinformatics rnaseq ncbi nih geo sra
Language:Python 1
bohnelang / PubmedJavascriptReferenceList
This small JavaScript generates a reference list from a PubMed query directly in a HTML page.
pubmed javascript ajax html dom reference list publications nih
Language:HTML 1
christopherBelter / qvr_processing
A function to process QVR data using R
r data-cleaning cleaning-data nih qvr
Language:R 1
radxrad / dbgap-reporter
Jupyter Notebooks to analyze the number of data access requests for dbGaP datasets and publication including RADx datasets.
covid-19 datasets dbgap fair radx radx-rad radx-dht radx-tech radx-up nih bibliometics
Language:Jupyter Notebook 1
s4ndhyac / RxBot
An AI Bot that gives you information on medical drugs
bot nih nlm nodejs rxnorm umls witai
Language:JavaScript 1
NIH_MIB_Deep_Learning_Preprocessing
smehralivand / NIH_MIB_Deep_Learning_Preprocessing
This repository shares the preprocessing scripts for Deep Learning we use at the Molecular Imaging Branch at the NIH
nih voi preprocessing-scripts segmentations natural-language-processing
Language:Python 1
USCbiostats / LAsBEST
Repository of USC's LA's BEST program. https://lasbest.usc.edu/
biostatistics datascience education nih rprogramming rstats training
Language:HTML 1

nih

Slicer / Slicer

Slicer / SlicerGitSVNArchive

thtang / CheXNet-with-localization

CBICA / CaPTk

gregwchase / nih-chest-xray

Slicer / ExtensionsIndex

CBICA / BrainMaGe

YeongHyeon / Lung_Extraction_from_CXR

novasmedley / f31-templates

rnabioco / nihexporter

arundasan91 / Macular-Degeneration

christopherBelter / nih_reporter_api

burkesquires / Build-a-Reproducible-Jupyter-Workflow-From-Scratch

corybrunson / NIH-proposal-template

hydra-billing / hyaml

aceat64 / ppe-donations

andrewallenbruce / codexchain

MOSAICS-NIH / MOSAICS

seandavi / ClinicalTrialsAPI

jermwatt / pynih

National-COVID-Cohort-Collaborative / short-course-2022-june

nih-sparc / data-portal

aofarrel / SRANWRP

kevinmastascusa / NIHDataFetcher

lab-rasool / MINDS

liuziwei7 / nih-funding-visualization

National-COVID-Cohort-Collaborative / short-course-2024-january

usmannazir / ChestX

Aculeasis / docker-starter

arcones / sra-collector

bohnelang / PubmedJavascriptReferenceList

christopherBelter / qvr_processing

radxrad / dbgap-reporter

s4ndhyac / RxBot

smehralivand / NIH_MIB_Deep_Learning_Preprocessing

USCbiostats / LAsBEST