monai

There are 4 repositories under monai topic.

MONAI
Project-MONAI / MONAI
AI Toolkit for Healthcare Imaging
deep-learning healthcare-imaging medical-image-computing medical-image-processing monai python3 pytorch
Language:Python 7409
Project-MONAI / tutorials
MONAI Tutorials
monai monai-tutorials pytorch jupyter-notebook monai-workflows
Language:Jupyter Notebook 2271
Project-MONAI / research-contributions
Implementations of recent research prototypes/demonstrations using MONAI.
monai monai-components paper
Language:Python 1165
Project-MONAI / MONAILabel
MONAI Label is an intelligent open source image labeling and learning tool.
3d-slicer-extension active-learning pytorch deep-learning monai segmentation medical-imaging machine-learning 3d
Language:Python 766
Project-MONAI / GenerativeModels
MONAI Generative Models makes it easy to train, evaluate, and deploy generative models and related applications
anomaly-detection diffusion-models generative-adversarial-network generative-models image-synthesis image-translation medical-imaging monai mri-reconstruction
Language:Jupyter Notebook 710
Lee-Gihun / MEDIAR
(NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality Microscopy"
biomedical cell-biology cell-segmentation instance-segmentation monai multi-modality neurips-2022 pytorch pytorch-implementation pytorch-segmentation vision-transformer miscroscopy multi-resolution
Language:Python 153
DCBIA-OrthoLab / SlicerAutomatedDentalTools
A 3D Slicer extension to use AMASSS, ALI-CBCT and ALI-IOS
3d-slicer-extension 3d-images 3d-models deep-learning landmark-localization machine-learning orthodontics segmentation monai pytorch
Language:Python 133
davidiommi / Pytorch--3D-Medical-Images-Segmentation--SALMON
Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.
segmentation monai organs pytorch unet-pytorch unet unet-3d deep-learning monai-toolbox nnunet transformers unetr mri
Language:Python 123
Project-MONAI / monai-deploy-app-sdk
MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.
monai healthcare medical-imaging image-processing dicom deploy workflow pipeline ai ml deep-learning machine-learning model-deployment model-serving mlops ml-platform ml-infrastructure python pytorch
Language:Jupyter Notebook 117
Project-MONAI / monai-deploy
MONAI Deploy aims to become the de-facto standard for developing, packaging, testing, deploying and running medical AI applications in clinical production.
monai ai medical-imaging inference healthcare guidelines open-standard ai-application-development ai-application-deployment deep-learning machine-learning mlops ml-platform pytorch python dicom fhir radiology pathology
Language:Shell 106
amrzhd / MRISkullStripping
Developing a UNet3D model for accurate MRI skull stripping using the Calgary Campinas 359 dataset, enhancing neuroimaging preprocessing workflows.
biomedical-image-processing image-segmentation mri mri-images nibabel python pytorch unet unet-image-segmentation monai
Language:Jupyter Notebook 96
project-lighter / lighter
Streamline deep learning experiments using config files
classification config deep-learning hydra monai object-detection pytorch pytorch-lightning segmentation self-supervised-learning yaml
Language:Python 66
Warvito / generative_chestxray
Repository to train Latent Diffusion Models on Chest X-ray data (MIMIC-CXR) using MONAI Generative Models
chest-xray-images diffusion-models latent-diffusion-models medical-imaging mimic-cxr monai
Language:Python 61
bruAristimunha / Synthetic-Sleep-EEG-Signal-Generation-using-Latent-Diffusion-Models
Code for the paper published in Deep Generative Models for Health Workshop at the Neurips 2023.
deep-learning eeg generative-monai latent-diffusion-models monai
Language:Python 57
KCL-BMEIS / VS_Seg
Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)
deep-learning medical-image-segmentation monai pytorch
Language:Python 50
creatis-myriad / ASCENT
cardiAc ultrasound Segmentation & Color-dopplEr dealiasiNg Toolbox (ASCENT)
deep-learning hydra monai nnunet pytorch-lightning segmentation ultrasound-imaging
Language:Python 40
pooya-mohammadi / pooya-mohammadi
This is Pooya Mohammadi, Open Source Enthusiast, AI Developer & Researcher
deep-learning pytorch fastapi mlops python tensorflow machine-learning medical-image-analysis medical-image-processing medical-image-segmentation monai
28
mdciri / teeth-segmentation
teeth segmentation using pytorch and monai
deep-learning gui monai pytorch teeth-segmentation image-segmentation unet-image-segmentation
Language:Python 24
Project-MONAI / SlicerMONAIViz
MONAIViz - 3D Slicer Extension
3d-slicer-extension monai
Language:Python 24
KitwareMedical / ITKPOCUS
An open source library for streaming and preprocessing point-of-care ultrasound video.
image-processing ultrasound point-of-care point-of-care-ultrasound openigtlink itk monai itkpocus
Language:Jupyter Notebook 23
pycadd / YouTube-Tutorials
All the code used in our YouTube videos (starting from 2024 videos) can be found here.
computer-vision healthcare-application medical-imaging monai python vtk
Language:Python 13
Rim-chan / SpaceNet7-Buildings-Detection
Building detection from the SpaceNet dataset using UNet.
building-detection deep-learning monai python pytorch pytorch-lightning remote-sensing satellite-imagery spacenet-dataset unet-image-segmentation computer-vision
Language:Python 13
CCIG-Champalimaud / adell-mri
A deep learning model and training/testing/inference library in PyTorch for segmentation, classification, object detection and self-supervised learning using radiology data.
clinical-images deep-learning magnetic-resonance-imaging monai mri torch
Language:Python 9
JohnMasoner / MedicalZoo
A General Medical Image Segmentation Framework.(Multi-Modal, Mono-Modal, 2D, 3D)
monai pytorch deep-learning medical-imaging segmentation unet 2d-convolution 3d-convolutions image-processing transformer
Language:Python 9
bhimrazy / lung-tumours-segmentation
Empowering 3D Lung Tumour Segmentation with MONAI
lung-tumor-segmentation monai python pytorch unet-image-segmentation
Language:Jupyter Notebook 7
aminbenmansour / automatic-liver-segmentation
using labeled and unlabeled (and doing the labeling manually) data, the data is basically medical files (NIfTI & DICOM images) to ensure a good segmentation of the liver
pytorch monai cuda cudnn computer-vision unet-image-segmentation
Language:Jupyter Notebook 6
arkanandi / Cardiac_Segmentation_ACDC
Deep learning based cardiac segmentation
cardiac-segmentation deep-learning monai pytorch-lightning segmentation-models
Language:Python 6
bhoeckendorf / napari-monailabel
MONAI Label client plugin for napari
deep-learning monai monailabel napari napari-plugin segmentation
Language:Python 6
aaronsossin / Cannabis-MRI-Machine-Learning
Applying CNNs, Decoders, and Transfer Learning to distinguish the MRIs of heavy cannabis users vs. controls
cnn cannabis transfer-learning decoder mri-images brain neuroscience stanford svm-classifier spacenet monai nilearn
Language:TeX 4
Jianningli / skullVAE
training β-VAE by Aggregating a Learned Gaussian Posterior with a Decoupled Decoder
disentangled-representations disentanglement skull-reconstruction variational-autoencoder variational-inference shape-completion vae monai unsupervised-learning
Language:Python 4
leslie-zi-pan / WMH_Segmentation_ipynb
Brain white matter hyperintensity segmentation, with T1 and FLAIR MRI images, using UNet.
dementia dementia-diagnosis white-matter-hyperintensities white-matter-segmentation brain-segmentation unet unet-pytorch pytorch deep-learning monai
Language:Jupyter Notebook 4
pederismo / CTFSH
Code for the paper CTFSH: Full Head CT Anomaly Detection with Unsupervised Learning
anomaly-detection unsupervised-learning deep-learning pytorch pytorch-lightning monai medical-imaging
Language:Python 4
wiktorowski211 / knee-acl-mri
MRI-based semi-automated detection of ACL(Anterior Cruciate Ligament) injury using PyTorch
acl classification convolutional-neural-networks deep-learning knee-injuries medical-image-processing medical-imaging mri mri-images pytorch pytorch-cnn 3d-cnn monai kneenet
Language:Python 4
AGnias47 / brats-challenge-cis-5528
Brain Tumor Segmentation Pipeline for BraTS Challenge
brats monai optuna segmentation unet-image-segmentation
Language:Python 3
ciroraggio / AugmentedDataLoader
Medical image augmentation tool that can be integrated with Pytorch & MONAI.
biomedical-image-processing monai pytorch
Language:Python 3
MartinKalema / RSNA-Abdominal-Trauma-Detection
Abdominal Trauma Detection Model using MONAI.
machine-learning monai classification convolutional-neural-networks densenet264
Language:Jupyter Notebook 3

monai

Project-MONAI / MONAI

Project-MONAI / tutorials

Project-MONAI / research-contributions

Project-MONAI / MONAILabel

Project-MONAI / GenerativeModels

Lee-Gihun / MEDIAR

DCBIA-OrthoLab / SlicerAutomatedDentalTools

davidiommi / Pytorch--3D-Medical-Images-Segmentation--SALMON

Project-MONAI / monai-deploy-app-sdk

Project-MONAI / monai-deploy

amrzhd / MRISkullStripping

project-lighter / lighter

Warvito / generative_chestxray

bruAristimunha / Synthetic-Sleep-EEG-Signal-Generation-using-Latent-Diffusion-Models

KCL-BMEIS / VS_Seg

creatis-myriad / ASCENT

pooya-mohammadi / pooya-mohammadi

mdciri / teeth-segmentation

Project-MONAI / SlicerMONAIViz

KitwareMedical / ITKPOCUS

pycadd / YouTube-Tutorials

Rim-chan / SpaceNet7-Buildings-Detection

CCIG-Champalimaud / adell-mri

JohnMasoner / MedicalZoo

bhimrazy / lung-tumours-segmentation

aminbenmansour / automatic-liver-segmentation

arkanandi / Cardiac_Segmentation_ACDC

bhoeckendorf / napari-monailabel

aaronsossin / Cannabis-MRI-Machine-Learning

Jianningli / skullVAE

leslie-zi-pan / WMH_Segmentation_ipynb

pederismo / CTFSH

wiktorowski211 / knee-acl-mri

AGnias47 / brats-challenge-cis-5528

ciroraggio / AugmentedDataLoader

MartinKalema / RSNA-Abdominal-Trauma-Detection