medical-images

There are 8 repositories under medical-images topic.

torchio
fepegar / torchio
Medical imaging toolkit for deep learning
pytorch medical-image-computing deep-learning data-augmentation medical-images machine-learning python medical-image-processing medical-image-analysis medical-imaging-datasets medical-imaging-with-deep-learning augmentation
Language:Python 1968
NifTK / NiftyNet
[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
tensorflow distributed ml neural-network python python2 python3 pip deep-neural-networks deep-learning convolutional-neural-networks medical-imaging medical-image-computing medical-image-processing medical-images segmentation gan autoencoder medical-image-analysis image-guided-therapy
Language:Python 1355
awesome-image-registration
Awesome-Image-Registration-Organization / awesome-image-registration
image registration related books, papers, videos, and toolboxes
awesome awesome-list image image-processing image-registration medical-images natural-images point-cloud-registration remote-sensing-image slam
1121
arnoweng / CheXNet
A pytorch reimplementation of CheXNet
classification deep-learning localization medical-images pneumonia pytorch thoracic-diseases x-ray
Language:Python 554
delira-dev / delira
Lightweight framework for fast prototyping and training deep neural networks with PyTorch and TensorFlow
deep-learning radiology medical-imaging machine-learning pytorch tensorflow delira medical-images
Language:Python 222
amiralansary / rl-medical
Deep Reinforcement Learning (DRL) agents applied to medical images
tensorflow machine-learning deep-learning medical-imaging neural-network reinforcement-learning landmark-detection python reproducibility dqn-variants rl-medical medical-images drl deep-reinforcement-learning agents-applied
Language:Python 176
daili0015 / ModelFeast
Pytorch model zoo for human, include all kinds of 2D CNN, 3D CNN, and CRNN
model-zoo modelzoo 3dcnn crnn non-local action-recognition pytorch-classification pytorch medical-images c3d i3d
Language:Python 153
webnamics / u-dicom-viewer
A simple web browser DICOM viewer for any device.
dicom viewer javascript cornerstonejs react medical-images dicomviewer universal-dicom-viewer dicom-viewer
Language:JavaScript 151
Wuziyi616 / CFUN
Combining Faster R-CNN and U-net for efficient medical image segmentation
pytorch medical-images unet faster-rcnn efficient
Language:Python 144
danishm / mritopng
A simple python module to make it easy to batch convert DICOM files to PNG images.
python medical medical-images dicom dicom-images dicom-converter png
Language:Python 136
pydicom / deid
best effort anonymization for medical images using python
dicom pydicom medical medical-images deidentify anonymize
Language:Python 134
davidiommi / 3D-CycleGan-Pytorch-MedImaging
Pytorch pipeline for 3D image domain translation using Cycle-Generative-Adversarial-networks, without paired examples.
3d-cycle-gan cyclegan cyclegan-pytorch medical-imaging medical-images translation
Language:Python 115
BRML / CNNbasedMedicalSegmentation
Code for reproducing the results of our paper on CNN-based medical image segmentation
computer-vision machine-learning medical-images
Language:Python 87
laurahanu / 2D-and-3D-Deep-Autoencoder
Convolutional AutoEncoder application on MRI images
deep-learning neuralnetworks mri-images medical-imaging medical-images autoencoder imaging lasagne theano deep-autoencoders unsupervised-learning
Language:Python 68
wolf-bailang / AI-Projects
AI项目（强化学习、深度学习、计算机视觉、推荐系统、自然语言处理、机器导航、医学影像处理）
recommendation-algorithms deep-reinforcement-learning medical-images robotics deep-learning computer-vision graph-neural-netowrks machine-learning
Language:Jupyter Notebook 64
funnyzhou / A4SM
Archive for Self-supervised learning in Medical images (A4SM).
self-supervised-learning medical-images representation-learning paper-list
55
xyj77 / MCF-3D-CNN
Temporal-spatial Feature Learning of DCE-MR Images via 3DCNN
3dcnn fusion keras temporal-spatial feature-learning dce-mri medical-images
Language:Python 46
L0SG / grouped-ssd-pytorch
PyTorch implementation of Grouped SSD (GSSD) and GSSD++ for focal liver lesion detection from multi-phase CT images (MICCAI 2018, IEEE TETCI 2021)
object-detection medical-image-computing single-shot-multibox-detector liver-disease medical-diagnostics deep-learning liver-disease-prediction medical-images pytorch ssd
Language:Python 43
TimothyZero / MedVision
Medical Image Vision Operators, such as RoIAlign, DCNv1, DCNv2 and NMS for both 2/3D images.
pytorch cuda medical-image-detection medical-image-processing detection-3d data-augmentation medical-image-segmentation medical-images
Language:Python 42
TRKuan / cxr8
deep-learning convolutional-neural-networks medical-images
Language:Jupyter Notebook 36
zizhaozhang / mdnet-cvpr2017
Torch implementation for MDNet: A Semantically and Visually Interpretable Medical Image Diagnosis Network
cvpr-2017 torch7 medical-images
Language:Jupyter Notebook 33
ganslate-team / ganslate
Simple and extensible GAN image-to-image translation framework. Supports natural and medical images.
contrastive-unpaired-translation cut cyclegan domain-adaptation gan image-to-image-translation image-translation medical-images natural-images pix2pix revgan style-transfer
Language:Python 32
RSIP-Vision / medio
Medical images I/O python package
medical-images io itk nibabel pydicom python
Language:Python 32
RnR-2018 / Deep-learning-with-PyTorch-and-GCP
Tutorial and framework code for deep learning in biomedical applications with PyTorch and (if necessary) Google Cloud Platform.
deep-learning pytorch google-cloud-platform anaconda3 medical-images medical-imaging biomedical-engineering computer-vision andrew-laine columbia-university tutorial
28
EIDOSLAB / UNITOPATHO
Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.2021.9506198
neural-networks health data cancer histopathology histopathology-images histopathological-image medical-image-processing medical-images
Language:Jupyter Notebook 26
asvcode / MedicalImaging
Tutorials that take an in depth look at how to view and manipulate DICOM images and how to get them ready for machine learning
dicom dicom-images health medical-images medical-imaging
Language:Jupyter Notebook 25
lucasmansilla / ACRN_Chest_X-ray_IA
Learning Deformable Registration of Medical Images with Anatomical Constraints
image-registration image-alignment deep-learning anatomical-constraints medical-images machine-learning
Language:Python 23
laurahanu / Improved-Wasserstein-GAN-application-on-MRI-images
Improved Wasserstein GAN (WGAN-GP) application on medical (MRI) images
wgan-gp wgan deep-learning neuralnetwork mri-images medical-imaging lasagne theano medical-images generative-adversarial-network unsupervised-learning gan-lasagne improved-wgan wasserstein-gan
Language:Python 22
rogertrullo / tensorflow_medical_images_segmentation
Here I post a code for doing segmentation in medical images using tensorflow
medical-images tensorflow segmentation python convolutional-neural-networks cnn fully-convolutional-networks fcn
Language:Python 20
tcxxxx / DermNet-images-crawler
Web crawler for DermNet (http://www.dermnet.com/) - one of the greatest data resources for skin diseases.
dermatology medical-imaging medical-images dermnet skin-cancer melanoma melanoma-recognition
Language:Python 19
aaz-imran / mar
ct-scans medical-images metal-artifact-reduction deep-learning
18
alegonz / kdsb17
Gaussian Mixture Convolutional AutoEncoder applied to CT lung scans from the Kaggle Data Science Bowl 2017
keras-tensorflow mixture-density-networks convolutional-autoencoder kaggle lung-cancer-detection medical-images gaussian-mixture-models python
Language:Python 18
ashkanpakzad / AirQuant
AirQuant is a framework based in MATLAB primarily for extracting airway measurements from fully segmented airways of a chest CT.
airways medical-imaging medical-image-processing lung-disease medical-image-analysis medical-image-computing skeletonization chest-ct matlab medical-images
Language:MATLAB 17
MeteorsHub / MedLabelMe
Segmentation annotation tool for 3D medical images
annotation-tool segmentation medical-images
Language:Python 17
omar-mohamed / X-Ray-Report-Generation
This is the implementation of the 'VSGRU' model mentioned in our paper 'Automated Radiology Report Generation using Conditioned Transformers'.
radiology-reports medical-images report-generator recurrent-neural-networks deep-learning conditioning
Language:Python 16
naamiinepal / medvlsm
Exploring Transfer Learning in Medical Image Segmentation using Vision-Language Models
medical-images segmentation vision-and-language
Language:Jupyter Notebook 14