genbank-files

There are 0 repository under genbank-files topic.

• jonas-fuchs / BAMdash

  create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks

  bam-filesbed-filescoverage-reportdashboardgenbank-filesinteractiveplotlyvcf-files
  Language:Python 20
• worst-genbank-ever

  TimothyStiles / worst-genbank-ever

  The most awful genbank file you'll ever need to parse.

  genbankgenbank-filesensemblddbj
  9

• mjmlab / pyinseq

  Python pipeline for analyzing INSeq Insertion Sequencing data

  inseqtn-seqsnakemake-workflowgenbank-files
  Language:Python 6

• ARYrt / Genbank-Info-Extractor

  This algorithm makes it possible to extract specific information from files in genbank format using regular expressions. When the file is processed, two files are generated, one in FASTA format and the other in tabular format (TSV), which are used to create the VirusMAPPER-linked databases.

  pythongenbank-files
  Language:Python 0

• mansikath / Fasta-to-Genbank-Converter

  A simple Python script using Biopython to convert FASTA files to GenBank format. The script prompts the user for input and output filenames, along with the molecule type (default is DNA). Ensure accurate and annotated GenBank files for your biological sequence data.

  bioinformatics-databiopythondna-sequencesfastafile-formatsgenbankgenbank-filesmolecularpythonpython3
  Language:Python 0

• mdcjansen / DBA

  DNA barcoding analysis pipeline

  ab1bioinformaticsbioinformatics-analysisblastndnadna-alignmentdna-barcodedna-barcodingdna-sequencesfastagenbankgenbank-filesgenomicsmega11phylogeneticsphylogenysanger-chromatogramsspecies-identification
  Language:Python 0

• rokzajc / rename_fasta

  Automatically rename fasta and genbank files to the species name mentioned in the file

  bioinformaticsfastagenbank-files
  Language:Python 0

• sgelias / gb2csv

  Parse a Genbank Flatfile to a CSV file.

  bioinformaticsdna-sequencesflat-filesgenbank-filespython
  Language:Python