gc-content

There are 0 repository under gc-content topic.

showteeth / ggcoverage
Visualize and annotate genomic coverage with ggplot2
base-frequency coverage gc-content gene genome-coverage ggplot2 ideogram peak track transcripts visualization
Language:R 218
manojmw / NetDNA-1.0
This is one of my first python scripts for a simple web-based tool that will generate basic biological data from the query DNA sequence.
dna sequence gc-content melting-temperature reverse-complement translation transcription nucleotide-sequence
Language:Python 4
TomMakesThings / Genome-Sequence-Analysis-HMM
HMM for annotating coding regions of DNA in S. cerevisiae chromosome III
hmm hidden-markov-model genome-sequence-analysis chromosome yeast computational-biology baum-welch forward-algorithm gc-content s-cerevisiae viterbi-algorithm bioinformatics
Language:Jupyter Notebook 3
0xSumitBanik / Nucleic-Acid-Analysis
List of few tools to study DNA Sequences and various operations on it. This repo can be used to solve Problems of ROSALIND (Bioinformatics Stronghold Track).
bioinformatics dna-sequences gc-content dna-transcription javascript
Language:CSS 2
danielfamiyeh / biothon
Biosequence analysis library
biosequences phylogenetic-dendrograms hierarchical-cluster-analysis bioinformatics clustalw clustering fasta gc-content hirschberg multiple-sequence-alignment needleman-wunsch pairwise-alignment sequence-alignment smith-waterman transcription
Language:Python 2
fatmakahveci / Rosalind-Solutions
My solutions for rosalind problems
bioinformatics bioinformatics-tool data algorithms algorithms-and-data-structures bioinformatics-algorithms dynamic-programming binarysearch tree tree-structure fibonacci aho-corasick aho-corasick-algorithm bm-algorithm kmp kmp-algorithm protein dna dna-analysis gc-content
Language:Python 1
sam217pa / prokgc
Computes gc contents in prokaryotic genomes
bioinformatics gc-content fasta cprogramming fast
Language:C 1
DanielSoenarto / bioturtle
a Python program to calculate GC content from fasta file
fasta-sequences gc-content nucleotide-sequence python
Language:Python 0
dissipative / ribosome
The Ribosome package is a Go library designed for efficient transcription and translation of DNA and RNA sequences, inspired by the real processes in living cells.
bioinformatics dna dna-sequences gc-content ncbi protein-sequence rna sequence-analysis
Language:Go 0
RackS103 / Segmentation-Algorithm-Comparison
A repository for my 2020-2021 AP Research project.
isochores compositional-segmentation benchmarking compositional-domains gc-content
Language:Python 0
sharkLoc / fqkit
🦀 Fqkit: A simple and cross-platform program for fastq file manipulation
bioinformatics fastq hts bio reads command-line-tool gc-content trim-fq demux
Language:Rust 0
MohdFarag / GC-sliding-window-calc
Sliding window program to compute the %GC in sequence of nucleotides.
bioinformatics dna-sequences gc-content python sliding-windows
Language:Python