sgelias

bioinformatic-pipelines

Include common methods in bioinformatics, including genome assembly (with and without reference genomes), and RNAseq processing.

kmer-generator

Get a kmer list given a single DNA or RNA sequence.

phytophthora-on-cocoa

Characterization of Phytophthora spp. growth fitness.

bacterial-16s-metabarcoding

cvb23-clean-architecture

AbiOrganizer

Extract and distribute ab1 files from Sanger DNA sequencing to folders of their respective owners.

ansible

aws-codepipeline-s3-codedeploy-linux

Use this sample when creating a simple pipeline in AWS CodePipeline while following the Simple Pipeline Walkthrough tutorial. http://docs.aws.amazon.com/codepipeline/latest/userguide/getting-started-w.html

blu

cerrado-yeasts

dose-response-procedure-in-R

classeq-frontend

The classeq frontend project based on Vibe template. Written in React framework.

classeq2

The improved implementation of the Classeq (in Rust)

coloured-messages

Print colored messages for python outputs.

csv2fas

Parse CSV files containing fasta components to a true fasta file.

django-reusable-custom-user-model

Provide a reusable custom user model.

gb2csv

Parse a Genbank Flatfile to a CSV file.

hivemind

Decentralized deep learning framework in pytorch. Built to train models on thousands of volunteers across the world.

iaas-week

Code from iaas-wek of Linux tips

lepiota

Contain the basic infrastructure to compose the Classeq-backend including Postgres, Neo4J, and Redis databases and the Django-based SSO.

lepiota-infra

mrbayes-ss-converter

Convert a dot-bracked format to a Mrbayes readble format.

mycelium-ui

The user interface of the Mycelium project

mypy

Optional static typing for Python 3 and 2 (PEP 484)

sgelias

stomata

A simple Rust application middleware.

the-measure-project

A simple and intuitive interface to perform biological measures on browser and generate basic statistics.

tsaloader