nucleotide-sequence

There are 0 repository under nucleotide-sequence topic.

• sshen8 / peglit

  Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif

  crisprgenome-editingnucleotide-sequence
  Language:Python 7

• tseemann / noary

  🍣 🦐 A lightweight nucleotide bacterial ortholog clustering tool

  genome-analysisnucleotide-sequenceclustering-algorithmorthologsparalogsbacterial-genomes
  Language:Perl 7

• manojmw / NetDNA-1.0

  This is one of my first python scripts for a simple web-based tool that will generate basic biological data from the query DNA sequence.

  dnasequencegc-contentmelting-temperaturereverse-complementtranslationtranscriptionnucleotide-sequence
  Language:Python 4

• DatDarkAlpaca / Degenerate-Bases

  The active development version of the degenerate bases algorithm.

  cartesian-productdegenerate-basescppnucleotide-sequence
  Language:C++ 3

• Logan1x / Nucleotide-Sequence-generator

  Random DNA 🧬 nucleotide generator and reverse compliment finder 🔬

  pythonflaskdnanucleotide-sequencereverse-complementhacktoberfest
  Language:HTML 3

• mutalyzer / backtranslate

  Protein to RNA reverse translation

  amino-acid-sequencebacktranslationsubstitutionsnucleotidestranslationcodonstop-codonamino-acidnucleotide-sequencereverse
  Language:Python 2

• rrbox / Nucleotide-Swift

  Swift package for bioinformatics

  bioinformaticsnucleotide-sequenceswiftswiftpm
  Language:Swift 2

• 0xnu / nwunsch

  Needleman–Wunsch algorithm implementation in Go.

  bioinformaticsneedlemanwunschnucleotidenucleotide-sequencenucleotidesprotein
  Language:Go 1

• Carmoruda / dna-sequence-generator

  DNA or RNA complementary, reverse and reverse complementary sequences generator

  pythontkinterdnadna-sequencesnucleotide-sequence
  Language:Python 1

• myon-bioinformatics / search_seq_including_spaces

  Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)

  pythonpython3amino-acid-sequenceamino-acidsbioinformaticsinsiliconucleotide-sequencenucleotidesjsoncsvstring-searchfasta
  Language:Python 1
• pngcat-client

  shamseen / pngcat-client

  API repo: https://github.com/shamseen/pngcat-api

  sbolsbol-visualena-portalsynthetic-biologynucleotidesnucleotide-sequence
  Language:JavaScript 1

• 0xnu / nwunsch_lua

  Needleman–Wunsch algorithm implementation in Lua.

  bioinformaticsneedlemanwunschnucleotidenucleotide-sequencenucleotidesprotein
  Language:Lua 0

• DanielSoenarto / bioturtle

  a Python program to calculate GC content from fasta file

  fasta-sequencesgc-contentnucleotide-sequencepython
  Language:Python 0

• dansta0804 / BIAP_website

  BIAP - A website that serves as a tool to analyze biological data (nucleotide and aminoacid sequences) and provide biology-related information in one place.

  aminoacid-sequencebiological-data-analysisdescriptionsnucleotide-sequence
  Language:HTML 0

• hewillk / istring

  Simple wrapper for std::basic_string<int8_t>.

  nucleotide-sequence
  Language:C++ 0

• tusharpandey003 / FASTA-Sequence-Analysis-Web-App

  Analysis of FASTA ,Protein,DNA sequence.

  data-sciencesequence-analysisstreamlitweb-applicationbioinformaticsbiotechnologydna-sequencesnucleotide-sequencedna-sequence-analysisfastafasta-sequencefasta-sequencesprotein-sequences
  Language:Python 0

• abhijeetsingh1704 / FilterByLength

  Filter fasta sequences by length

  fasta-sequencesnucleotide-sequenceamino-acid-sequencefilteringlength
  Language:Python

• madisonlondon / Nucleotide-Alignment

  This program determines the optimal alignment of two nucleotide sequences using the Smith–Waterman algorithm. Optimality, of course, is determined by the values of the gap penalty g and the weight matrix (that lists all of the s(ai , bj )). Finally the program outputs the optimal similarity score along with the optimal alignment.

  nucleotide-sequencenucleotide-alignmentsmith-waterman-alignmentsmith-waterman