dna-sequence-analysis

There are 0 repository under dna-sequence-analysis topic.

arminZolfaghari / DNA-Sequence-Classification
Analysis of DNA Sequence Classification Using Neural Networks - Bioinformatics Course Project - Winter 2022
classification deep-learning dna dna-sequence-analysis kmers word-embedding bioinformatics dna-analysis
Language:Jupyter Notebook 14
btmartin721 / raxml_ascbias
Script for removing or counting invariant sites for the RAxML ascertainment bias corrections
ascertainment-bias correction dna-sequence-analysis dna-sequences felsenstein filtering invariant-sites lewis phylogenetic-analysis phylogenetic-data phylogenetics raxml sequence-alignment stamatkis variant-sites
Language:Python 14
mcychan / DNAssist
DNAssist: the integrated editing and analysis of molecular biology sequences in Windows
dna-alignment dna-sequence-analysis dna-sequence-reader mfc
Language:C++ 11
cgohlke / dnacurve
DNA curvature analysis
dna dna-sequence-analysis python
Language:Python 5
MikolajMydel / msc-2022
App for analysing genetic code
biotechnology dna-sequence-analysis react protein-sequences sequencing
Language:TypeScript 5
coadunate / MICAS
MinION Classification & Alerting System
alerting dna-sequence-analysis flask-restful minion-sequencer nanopore-sequencing reactjs
Language:TypeScript 3
LasVegasCoder / Data-Science
Data Science Tools, Libraries, Classes and Functions
data-science datascience data-science-toolkit data-science-toolbox data-science-workbench python dna dna-sequences dna-assembly distance-calculation distance dna-sequence-analysis dna-sequence-reader dna-similarity dna-translation dna-transcription er-generator find-neareast-neighbors majority-vote word-counter
Language:Python 2
avvaruakshay / looper
Looper is an ultrafast DNA tandem repeat identification tool which works on basic arithmetic rules.
tandem-repeats dna-sequences microsatellites dna-sequence-analysis
Language:C++ 1
FAhtisham / DCNN-YY1
The repository contains the codes for the prediction of YY1 chromatin loops using densely connected neural network based on Kmer embeddings.
bioinformatics chromatin-loops deep-learning dna-sequence-analysis genomics
Language:Jupyter Notebook 1
standage / nuclmm
Simple Markov model of nucleotide composition for simulation and sequence analysis
dna-sequence-analysis markov-chain markov-model nucleotide-composition bioinformatics
Language:Python 1
deniz-askin / Aligned-DNA-Sequence-analysis
Code for analyzing aligned DNA sequences. Inputs are XML's created running BLAST remotely on the NCBI website.
dna-sequence-analysis dna-sequence-alignment
Language:Python 0
emredelibas / AFM_BITA
Alignment-free Method Based on Image Texture Analysis
bioinformatics texture-analysis dna-sequence-analysis similarity-analysis
Language:MATLAB 0
grace-raper / smith-waterman
The Smith-Waterman algorithm finds the optimal alignment of two sequences using dynamic programming techniques; Smith-Waterman is commonly used for DNA sequence alignment
computational-biology dna-sequence-analysis dynamic-programming java smith-waterman-algorithm
Language:Java 0
k-zyra / bio-app
An application for DNA sequence analysis written in Scala and deployed using Apache Spark&Hadoop.
apache-spark hadoop java sbt sbt-assembly scala spark bioinformatics bioinformatics-analysis bioinformatics-tool dna-sequence-analysis
Language:Scala 0
tusharpandey003 / FASTA-Sequence-Analysis-Web-App
Analysis of FASTA ,Protein,DNA sequence.
data-science sequence-analysis streamlit web-application bioinformatics biotechnology dna-sequences nucleotide-sequence dna-sequence-analysis fasta fasta-sequence fasta-sequences protein-sequences
Language:Python 0
vksuvam / bioinformatics
dna-sequence-analysis genomic-data-analysis machine-learning-algorithm
Language:Jupyter Notebook 0