INM-6 & IAS-6

multi-area-model

A large-scale spiking model of the vision-related areas of macaque cortex.

viziphant

Visualization of electrophysiological data from Elephant

networkunit

A SciUnit library for validation testing of spiking neural network models.

Python-Module-of-the-Week

nnmt

Neuronal Network Meanfield Toolbox - official documentation: https://nnmt.readthedocs.io

hybridLFPy

Biophysics-based prediction of LFPs from point-neuron networks

elephant

Elephant is the ElectroPhysiology Analysis Toolkit

beNNch

Modular performance benchmarking framework for neural network simulations

closed-loop-learning-in-autonomous-agents

Simulation and analysis scripts for "A closed-loop toolchain for neural network simulations of learning autonomous agents".

python-odmltables

An interface to convert odML structues to and from table-like representations, such as spreadsheets

swan

Swan (Sequential Waveform Analyzer) is an open-source graphical tool for tracking single units across multiple sessions of electrophysiological data that was recorded using chronically implanted microelectrode arrays.

lif_meanfield_tools

LIF Meanfield Tools

reproducing-polychronization

Builder

Compile scripts for local installs of software packages

python-neo

Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats

beaverdam

Beaverdam - Build, Explore, and Visualize Experimental Data and Metadata

beNNch-models

PyNEST models for performance benchmarking with beNNch

eligibility_propagation

h5py_wrapper

A wrapper to conveniently store nested python dictionaries in hdf5 files.

viziphant-new

Visualization of Elephant

beNNch-plot

Plotting styles for beNNch

SAS

Assessing the similarity of real matrices with arbitrary shape.

alpaca

Automated Lightweight Provenance Capture

alpaca_use_case

Repository containing the code necessary to reproduce the results of the Alpaca toolbox manuscript.

L2L

Learning to Learn: Gradient-free Optimization framework

MAM2EBRAINS

A large-scale spiking model of the vision-related areas of macaque cortex.

mesocircuit-model

Mesocircuit Model

sciunit

A Python framework for test-driven validation of scientific models.

SPADE_surrogates

Repository containing code necessary to reproduce the results of Stella, A., Bouss, P., Palm, G., & Grün, S. (2021). Generating surrogates for significance estimation of spatio-temporal spike patterns

ThaCoMac