intron

There are 0 repository under intron topic.

• dputhier / pygtftk

  A python package and a set of shell commands to handle GTF files

  bioinformaticsgenegtfbedbigwiggenomicstranscriptexoncdsgenomictssttssplicingdna-sequencesintronngschip-seqrna-seq
  Language:Python 43
• intronIC

  glarue / intronIC

  Retrieve annotated intron sequences and classify them as minor (U12-type) or major (U2-type) using a support vector-machine model.

  intronclassificationminor-intronu12-typesvmannotated-intron-sequencesannotationpythonbioinformaticsintron-sequencesannotated-intronsgenomeintron-classificationsequence-classification
  Language:Python 6

• casanova-lab / BPHunter

  Genome-wide detection of human variants that disrupt intronic branchpoints

  ngsbranchpointsplicingintrongeneticssoftware
  Language:Python 5

• intron-prediction-capstone / intron-utility

  U12-type intron prediction and file parsing utility in modern C++

  cppintrongeneticsgeneologypredictionbiologybioinformatics
  Language:C++ 4

• HallemLab / Wild_Worm_Codon_Adapter

  Shiny Web app for automatic codon optimization based on codon usage in Strongyloides species, Pristionchus species, Brugia malayi, as well as user-provided custom codon lookup tables

  strongyloidescodon-optimizationcodon-biascodon-adaptationintron
  Language:R 1

• nalaekaw / exon_intron

  Deep neural network for splice sites prediction

  cnnexonintronsplice-junctionssplice-site
  Language:Jupyter Notebook 1

• rwanwork / sam2irs

  sam2irs is a program for calculating intron retention scores (IRS') using input in the sequence alignment/map (SAM) format.

  intronretentionsamperl
  Language:Perl 1

• bettycatherine / Intron-extraction

  Intron extraction procedure

  intronphylogenomics
  Language:Perl 0