alexpreynolds

kmer-counter

Count kmers with a more efficient (faster) hash table

soda

Python-based UCSC genome browser snapshot-taker and gallery-maker

higlass-tabix-datafetcher

Provide remote access to remotely-hosted tabix files to HiGlass client applications

alexpreynolds

bam-js

Parse BAM and BAM index files in javascript for node and the browser

bed12-to-bam

Convert generic BED12 to BAM

dbscan

clustering data via DBSCAN

epilogos

Methods for summarizing and visualizing multi-biosample functional genomic annotations

fire-bed11-to-sam

Convert FIRE-linker-nucleosome data in BED11 to SAM

generic-filehandle

use a subset of the NodeJS promise-based file handle API to access both local and remote files

hclust

Agglomerative hierarchical clustering in JavaScript

hdf5-indexed-reader

higlass

Fast, flexible and extensible genome browser.

higlass-bigbed-datafetcher

Provide remote access to remotely-hosted bigBed files to HiGlass client applications

higlass-bigwig-datafetcher

higlass-multivec

Multivec Tracks for Higlass

higlass-pileup

higlass-sequence

Nucleotide sequence track for HiGlass

higlass-transcripts

Gene transcripts track for HiGlass

indexedfasta-js

Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi

k-mer-approaches-for-biodiversity-genomics

k-mer learning materials

LLM101n

LLM101n: Let's build a Storyteller

pypush

Cross-platform iMessage POC

react-awesome-popover

A smart popover component with animation support for ReactJS

react-higlass-test

Test bench for HiGlass-based React application

react-scrollwheel-test

Testing scrollwheel events in a React environment

recommender-proxy

Web service to pattern matching and retrieval tool

skylift

Wi-Fi Geolocation Spoofing with ESP8266 / ESP32

tfbs-bed7-to-sam

Convert TFBS data in BED6+1 to SAM

vis-utils