endoscopy

There are 0 repository under endoscopy topic.

med-air / EndoNeRF
[MICCAI'22] Neural Rendering for Stereo 3D Reconstruction of Deformable Tissues in Robotic Surgery
3d-reconstruction endoscopy miccai2022 nerf robotic-surgery
Language:Python 156
med-air / Endo-FM
[MICCAI'23] Foundation Model for Endoscopy Video Analysis via Large-scale Self-supervised Pre-train
foundation-model miccai2023 self-supervised endoscopy video large-scale pre-train
Language:Python 131
lppllppl920 / EndoscopyDepthEstimation-Pytorch
Official Repo for the paper "Dense Depth Estimation in Monocular Endoscopy with Self-supervised Learning Methods" (TMI)
depth-estimation endoscopy monocular-depth-estimation self-supervised-learning sfm
Language:Python 120
RichardObi / medigan
medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis
medical generation gans toolbox python deep-learning machine-learning computer-vision dataset endoscopy generative-adversarial-network generative-ai generative-model medical-image-analysis medical-image-dataset medical-imaging radiology synthesis synthetic-data magnetic-resonance-imaging
Language:Python 107
lppllppl920 / SAGE-SLAM
Official repo for the paper "SAGE: SLAM with Appearance and Geometry Prior for Endoscopy" (ICRA 2022)
slam differentiable-optimization representation-learning factor-graph endoscopy deep-learning 3d-reconstruction
Language:C++ 95
ShuweiShao / AF-SfMLearner
[MedIA2022 & ICRA2021] Self-Supervised Monocular Depth and Ego-Motion Estimation in Endoscopy: Appearance Flow to the Rescue
brightness-calibration computer-vision deep-learning depth-estimation endoscopy monodepth pose-estimation pytorch self-supervision
Language:Python 87
lppllppl920 / DenseDescriptorLearning-Pytorch
Official Repo for the paper "Extremely Dense Point Correspondences using a Learned Feature Descriptor" (CVPR 2020)
colmap descriptor descriptor-learning cvpr2020 sfm structure-from-motion endoscopy
Language:Python 76
HKU-MedAI / EndoGS
EndoGS: Deformable Endoscopic Tissues Reconstruction with Gaussian Splatting
endoscopy gaussian-splatting
Language:Python 64
nadeemlab / CEP
Computational Endoscopy Platform (advanced deep learning toolset for analyzing endoscopy videos) [MICCAI'22, MICCAI'21, ISBI'21, CVPR'20]
area-coverage colonoscopy computer-vision deep-learning domain-adaptation endoscopy gan pytorch real2sim segmentation sim2real tracking unsupervised-learning videos
Language:Python 63
CAMMA-public / cholect50
A repository for surgical action triplet dataset. Data are videos of laparoscopic cholecystectomy that have been annotated with <instrument, verb, target> labels for every surgical fine-grained activity.
action artificial-intelligence cholect40 cholect45 cholect50 data datasets deep-learning detection endoscopy laparoscopy localization machine-learning python pytorch recognition surgical-data-science tensorflow
Language:Python 28
ubamba98 / EAD2020
1st place solution to EAD 2020 (segmentation track) (https://ead2020.grand-challenge.org/)
artefact-detection endoscopy pytorch segmentation
Language:Python 15
aimi-lab / robust-pose-estimator
Deformable visual odometry for stereo endoscopic videos
deep deep-learning deformable endoscopy odometry slam
Language:Python 14
DebeshJha / Kvasir-Instrument
GitHub repository for the Kvasir-instrument dataset
benchmark colonoscopy dataset endoscopy instrument kvasir-instrument medical-image-segmentation open-source-data public-dataset segmentation surgical-instrument unet
13
ropensci / EndoMineR
Endoscopic and Pathological data extraction for various endo-pathological data extraction
r rstats endoscopy gastroenterology semi-structured-data text-mining r-package peer-reviewed
Language:R 12
charliebudd / torch-content-area
A PyTorch tool kit for estimating the circular content area in endoscopic footage.
computer-vision endoscopy pytorch
Language:Python 10
MikeHughesKent / PyFibreBundle
Python packaging for image processing of fibre bundle images, including core removal, mosaicing and super-resolution.
endomicroscopy endoscopy fiber image-processing imaging mosaicing super-resolution fiber-bundle
Language:Python 7
Roni-Lab / PPSNet
PPSNet: Leveraging Near-Field Lighting for Monocular Depth Estimation from Endoscopy Videos (arXiv, 2024)
clinical-data depth depth-estimation depth-refinement endoscopic-vision endoscopy endoscopy-video inverse-rendering knowledge-distillation monocular-depth-estimation near-field photometric sim2real transfer-learning
Language:Python 7
BananaJoh / cberry28endoscope
Live USB endoscope camera monitor on a Raspberry Pi with C-Berry28 display using OpenCV
raspberry-pi opencv camera endoscopy lcd-display
Language:C 5
henriklg / teacher-student-framework
Semi-supervised teacher-student framework
medical-imaging teacher-student semi-supervised-learning tensorflow kvasir-capsule hyper-kvasir self-learning vce endoscopy
Language:Jupyter Notebook 4
Magus4450 / EndoCheck
EndoCheck is a web application that allows doctors to automatically process endoscopic images or videos of patients to screen for anomalies.
django-rest-framework endoscopy gradcam image-classification image-localization image-processing react resnet-50
Language:JavaScript 4
salehahr / graph-extraction-networks
Extraction of graphs from skeletonised images.
graph-extraction graphs 2d-graphs spatial-graphs structural-graphs endoscopy tensorflow
Language:Python 3
TanBinh93 / Structure-from-Motion-based-on-Dense-Optical-Flow-method
Homologous point groups (point tracks) determination usable as the input of Structure from Motion (SfM).
dense-optical-flow structure-from-motion 3d-reconstruction endoscopy
Language:MATLAB 3
LightersWang / EndoBoost_FPPD13
Official repo of "EndoBoost: a plug-and-play module for false positive suppression during computer-aided polyp detection in real-world colonoscopy (with dataset)"
colonoscopy dataset deep-learning endoscopy normalizing-flows pytorch false-positive-reduction polyp-detection
2
PrathamLearnsToCode / Semantic_Segmentation_Surgery-Tools_U-Net
Semantic Segmentation of Robotic Tools used in Endoscopic Surgeries
2018 challenge endoscopy endovis robotic semantic-segmentation surgery tools unet
Language:Jupyter Notebook 2
sebastiz / EndoMineR
Endoscopic and Pathological data extraction for various endo-pathological data extraction
r rstats endoscopy gastroenterology semi-structured-data text-mining r-package peer-reviewed cancer-research
Language:R 2
DebeshJha / EndoCV2021-polyp_det_seg_gen
3rd International Endoscopy Computer Vision Challenge and Workshop (EndoCV2021)
colonoscopy endoscopy computer-vision challenges
Language:Python 1
DebeshJha / icpr-endotect-2020
GitHub for Endotect 2020 Challenge
polyps colonoscopy endoscopy endoscopic-images endoscopic-vision
1
mdteheran / Endoscopic_video-capsule
Video-capsule endoscopy (VCE) is a relatively recent healthcare technology in Colombia. In this case series we describe the findings of VCEs performed between Sep/2019-Jan/2023 in a gastroenterology unit.
capsule-endoscopy endoscopy case-reports gastrointestinal-bleeding gastrointestinal-diseases video-capsule-endoscopy
Language:R 1
NazilaEsmaeili / CE-NBI-Classification
This repository contains the algorithms that have already been developed on the public available CE-NBI Data Set of larynx (https://zenodo.org/record/6674034#.Yym-H3ZBw2w).
deep-learning endoscopy feature-engineering machine-learning medical-imaging larynx
Language:Jupyter Notebook 1
salehahr / graph-extraction-datagen
Generates training data for graph extraction.
2d-graphs graph-extraction graphs spatial-graphs structural-graphs training-data endoscopy
Language:MATLAB 1
sujal100 / Endoscopy-Image-Processing
Endoscopy Image Processing & Classification. Academic project as a part of the course AI in Biomedicine. Classify using pre-trained InceptionNetv3 and EfficientNetB2 classifiers and compare the accuracy.
artificial-intelligence classification deep-learning efficientnet endoscopy image-processing inception-v3 tensorflow
Language:Jupyter Notebook 1
darrentran33 / MuscleControlledSurgery
Prototype improvement to robotic surgery by using muscle activation
surgery robot endoscopy signal-processing
Language:C++ 0
selamgit / EfficientNet_for_Endoscopic_Images_Response_Prediction
PyTorch implementation of EfficientNet for response prediction
combined-machine-learning efficientnet-pytorch endoscopy ffn multimodal-deep-learning prediction-model
Language:Jupyter Notebook 0
sweeneyian / VersiLab_Plugin
Build for an ImageJ plugin called VersiLab_Plugin. Real-time acquisition and image processing for optical endo-microscopes
optical real-time image-processing oem microscopy endoscopy imagej-plugins proteus
Language:Java 0
SadhaSivamx / Esp32Cam
Code Repo for ESP32 Cam Based Codes
endoscopy esp32 esp32-cam project research sdcard sdcard-arduino
Language:C++
sharib-vision / retrievalCodes
video endoscopy imageretrieval autoencoder deeplearning-ai
Language:Python

endoscopy

med-air / EndoNeRF

med-air / Endo-FM

lppllppl920 / EndoscopyDepthEstimation-Pytorch

RichardObi / medigan

lppllppl920 / SAGE-SLAM

ShuweiShao / AF-SfMLearner

lppllppl920 / DenseDescriptorLearning-Pytorch

HKU-MedAI / EndoGS

nadeemlab / CEP

CAMMA-public / cholect50

ubamba98 / EAD2020

aimi-lab / robust-pose-estimator

DebeshJha / Kvasir-Instrument

ropensci / EndoMineR

charliebudd / torch-content-area

MikeHughesKent / PyFibreBundle

Roni-Lab / PPSNet

BananaJoh / cberry28endoscope

henriklg / teacher-student-framework

Magus4450 / EndoCheck

salehahr / graph-extraction-networks

TanBinh93 / Structure-from-Motion-based-on-Dense-Optical-Flow-method

LightersWang / EndoBoost_FPPD13

PrathamLearnsToCode / Semantic_Segmentation_Surgery-Tools_U-Net

sebastiz / EndoMineR

DebeshJha / EndoCV2021-polyp_det_seg_gen

DebeshJha / icpr-endotect-2020

mdteheran / Endoscopic_video-capsule

NazilaEsmaeili / CE-NBI-Classification

salehahr / graph-extraction-datagen

sujal100 / Endoscopy-Image-Processing

darrentran33 / MuscleControlledSurgery

selamgit / EfficientNet_for_Endoscopic_Images_Response_Prediction

sweeneyian / VersiLab_Plugin

SadhaSivamx / Esp32Cam

sharib-vision / retrievalCodes