nucleotide-alignment

There are 0 repository under nucleotide-alignment topic.

ToniWestbrook / paladin
Protein Alignment and Detection Interface
unh bioinformatics protein-alignment nucleotide-alignment uniprot paladin
Language:C 56
JosephCrispell / homoplasyFinder
A tool to identify and annotate homoplasies on a phylogeny and sequence alignment
phylogeny indels nucleotide-alignment consistency mutations homoplasy
Language:R 18
ToniWestbrook / paladin-plugins
Pipeline plugins for PALADIN, providing HPC support, abundance (taxonomy, go terms), customized reports, etc
unh paladin bioinformatics protein-alignment nucleotide-alignment hpc metabolic-pathways taxonomy uniprot
Language:Python 3
Alepidoptera7 / ssDNA-Aptamer-Prediction-
BMEB Thesis project which develops ssDNA aptamer sequences from probabilistic data per provided protein epitope.
aptamers epitopes epitopes-prediction bioinformatics machine-learning nucleotide-alignment
Language:Python 1
madisonlondon / Nucleotide-Alignment
This program determines the optimal alignment of two nucleotide sequences using the Smith–Waterman algorithm. Optimality, of course, is determined by the values of the gap penalty g and the weight matrix (that lists all of the s(ai , bj )). Finally the program outputs the optimal similarity score along with the optimal alignment.
nucleotide-alignment nucleotide-sequence smith-waterman smith-waterman-alignment

ToniWestbrook / paladin