fepegar

torchio

Medical imaging toolkit for deep learning

unet

"pip install unet": PyTorch Implementation of 1D, 2D and 3D U-Net architecture.

highresnet

PyTorch implementation of HighRes3DNet

SlicerPyTorch

This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.

staple

Python implementation of the STAPLE segmentation algorithm

SlicerTorchIO

3D Slicer module for TorchIO.

SlicerParcellation

3D Slicer modules for brain segmentation using deep learning.

resector

Algorithm to simulate resection surgery on brain MRI scans. Published in MICCAI 2020, extended in IJCARS.

resseg-ijcars

Code, data and model for Pérez-García et al. 2021, "A self-supervised learning strategy for postoperative brain cavity segmentation simulating resections"

gestures-miccai-2021

Code for "Pérez-García et al. 2021, Transfer Learning of Deep Spatiotemporal Networks to Model Arbitrarily Long Videos of Seizures, MICCAI 2021".

torchio-notebooks

jvol

JPEG compression for 3D volumes.

advent-of-code-2022

My solutions for Advent of Code 2022

telegram-gpt-bot

Use ChatGPT with your voice (in any language) and Telegram.

advent-of-code-2020

advent-of-code-2023

My solutions for Advent of Code 2023, first time trying Rust!

arxiv-utils

Meaningful titles for tabs and PDF downloads! Also supports tab search.

azure-tools

azure-tools

check-dirty-repos

Small bash script to check whether git repositories are dirty.

donut

github-stats

gpt-cli-assistant

Run terminal commands with GPT

kennington

kennington-frontend

phd-thesis

PhD thesis of Fernando Pérez-García.

rsu-calculator

https://rsu-calculator.streamlit.app/

telegram-transcribe-audios

Transcribe looong voice notes so you can read instead of listening.

transformers

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

tyger

Remote signal processing.

website

wedl

Small command line utility to download from https://wetransfer.com