hpo

There are 3 repositories under hpo topic.

LiYangHart / Hyperparameter-Optimization-of-Machine-Learning-Algorithms
Implementation of hyperparameter optimization/tuning methods for machine learning & deep learning models (easy&clear)
hyperparameter-optimization machine-learning-algorithms hyperparameter-tuning machine-learning tuning-parameters grid-search random-search optimization hpo bayesian-optimization genetic-algorithm particle-swarm-optimization hyperband random-forest knn svm python-examples python-samples deep-learning artificial-neural-networks
Language:Jupyter Notebook 1253
AgileRL
AgileRL / AgileRL
Streamlining reinforcement learning with RLOps. State-of-the-art RL algorithms and tools.
reinforcement-learning deep-reinforcement-learning deep-learning rlops evolutionary-algorithms machine-learning pytorch gym hpo python training mlops hyperparameter-optimization hyperparameter-tuning agilerl multi-agent multi-agent-reinforcement-learning pettingzoo automl distributed
Language:Python 504
Western-OC2-Lab / Intrusion-Detection-System-Using-Machine-Learning
Code for IDS-ML: intrusion detection system development using machine learning algorithms (Decision tree, random forest, extra trees, XGBoost, stacking, k-means, Bayesian optimization..)
machine-learning random-forest decision-tree xgboost bayesian-optimization hyperparameter-optimization hpo kmeans python-examples intrusion-detection intrusion-detection-system autonomous-vehicles cyber-security network-security stacking cicids2017 catboost ensemble-learning lightgbm
Language:Jupyter Notebook 346
human-phenotype-ontology
obophenotype / human-phenotype-ontology
Ontology for the description of human clinical features
hpo ontology phenotype phenotyping ontologies obo owl semantic-web obofoundry monarchinitiative
Language:Makefile 279
b2ihealthcare / snow-owl
:owl: Snow Owl Terminology Server - production-ready, scalable, supports FHIR R4, FHIR R5, SNOMED CT International and Extensions, LOINC, ICD-10, dm+d, custom code systems and many others
snomed-ct loinc icd owl fhir fhir-server elasticsearch terminology snomed terminology-server java fhir-api conceptmap codesystem valueset nlp hpo knowledge-graph
Language:Java 250
LGE-ARC-AdvancedAI / auptimizer
An automatic ML model optimization tool.
hyperparameter-optimization hpo hyperparameter-tuning deep-learning automl automated-machine-learning machine-learning neural-networks data-science data-engineering
Language:Python 199
phenotips
phenotips / phenotips
The open-source version of PhenoTips is no longer maintained. PhenoTips makes it simple to record clinical findings observed in patients with possible genetic disorders through an easy-to-use Web interface
java hpo phenotips patients
Language:Java 102
releaunifreiburg / WellTunedSimpleNets
[NeurIPS 2021] Well-tuned Simple Nets Excel on Tabular Datasets
automl deep-learning feedforward-neural-network hpo hyperparameter-optimization regularization state-of-the-art neurips-2021 tabular-data
Language:Python 71
jianzhnie / AutoTabular
Automatic machine learning for tabular data. ⚡🔥⚡
automl structured-data pytorch-lightning hpo tabular-data scikit-learn xgboost lightgbm catboost machine-learning data-science feature-engineering deep-learning
Language:Python 66
GeneDx / phenopy
Phenotype comparison tools using semantic similarity.
hpo semantic-similarity phenotypes phenomics
Language:Python 54
ncbi-nlp / PhenoTagger
PhenoTagger
bionlp hpo phenotype-concept-recognition
Language:GAP 48
goktug97 / bohb-hpo
Bayesian Optimization Hyperband Hyperparameter Optimization
bayesian bayesian-optimization bohb hpo hyperband hyperparameter-optimization
Language:Python 36
monarch-initiative / loinc2hpo
Java library to map LOINC-encoded test results to Human Phenotype Ontology
loinc fhir hpo ehr healthcare monarchinitiative
Language:Java 29
TheJacksonLaboratory / loinc2hpoAnnotation
loinc2hpo Annotation Data
loinc hpo monarchinitiative loinc2hpo
Language:Python 24
anergictcell / pyhpo
A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology
bioinformatics hpo hpo-similarity ontology
Language:Python 23
GeneDx / txt2hpo
Python library for extracting HPO encoded phenotypes from text
phenotype phenotype-ontologies information-retrieval parsing medical-records phenotypes hpo python
Language:Python 23
mlr3mbo
mlr-org / mlr3mbo
Flexible Bayesian Optimization in R
machine-learning r optimization bayesian-optimization model-based-optimization bbotk mlr3 r-package automl gaussian-process hyperparameter-optimization hyperparameter-tuning optimizer random-forest cran black-box-optimization hyperparameter tuning hpo
Language:R 23
drseb / HPO-translations
Internationalisation of the HPO content
translation language ontology semantic-web hpo hpo-translations phenomics phenotypes phenotyping phenotype-ontologies obofoundry
20
hyeonsangjeon / Hyperparameters-Optimization
Hyperparameters-Optimization
hyperparameter-optimization hyperparameter-tuning hpo optimization tpe hyperparameter hyperparameter-search gridsearchcv randomsearchcv hyperbandsearchcv bayessearchcv fmin grid-search random-search hyperband bayesian-optimization tree-structured tree-of-parzen-estimator
Language:Jupyter Notebook 16
releaunifreiburg / DPL
[NeurIPS 2023] Multi-fidelity hyperparameter optimization with deep power laws that achieves state-of-the-art results across diverse benchmarks.
benchmark computer-vision deep-learning hpo hyperparameter-optimization hyperparameter-tuning large-language-models llm machine-learning mlp natural-language-processing neurips neurips-2023 power-laws scaling-laws tabular-data transformer
Language:Python 12
TheJacksonLaboratory / hpo-web
a web application to search and navigate the Human Phenotype Ontology (HPO)
groovy grails3 angular hpo
Language:HTML 12
monarch-initiative / HpoTextMining
Perform text mining for identification of HPO terms in free text from scientific publication.
monarchinitiative hpo ontology text-mining
Language:Java 10
monarch-initiative / phenopacket-store
Collection of phenopackets
ga4gh hpo phenopackets
Language:Jupyter Notebook 10
releaunifreiburg / DyHPO
[NeurIPS 2022] Supervising the Multi-Fidelity Race of Hyperparameter Configurations
convolutional-neural-networks deep-kernel-gps deep-kernel-learning deep-learning gaussian-processes grey-box hpo hyperparameter-optimization multi-armed-bandits multi-fidelity neural-networks neurips-2022 state-of-the-art
Language:Python 10
Phenomics / ontolib
A modern Java library for working with (biological) ontologies.
ontology hpo mpo obo ontology-matching
Language:Java 9
umcu / dutch-medical-concepts
Instructions and code to create for a table of UMLS, SNOMED or HPO concepts containing Dutch medical names, usable in named entity recognition and linking methods such MedCAT.
medcat medical-natural-language-processing umls snomed dutch medical-text-mining clinical-nlp medical named-entity-linking named-entity-recognition hpo
Language:Jupyter Notebook 8
davetang / human_phenotype_ontology
Resources for working with the Human Phenotype Ontology
hpo
Language:Perl 7
drseb / HPO-archive
HPO archive of the ontology and annotations
hpo annotations hpo-archive ontology archive phenomics phenotypes phenotyping phenotype-ontologies
7
automl / arlbench
HPO and Architecture Benchmarking for RL: Dynamically, Reactive and Efficient
autorl hpo rl
Language:Python 6
Human-Phenotype-Ontology / Human-Phenotype-Ontology.github.io
Human Phenotype Ontology Website
website ontology phenotype hpo
Language:CSS 6
demoronator / DiagnosisAssistant
AI Diagnosis Assistant for Diagnosing Rare Diseases
diagnosis hpo orphanet rare-diseases symptom disease iubdc pronto artificial-intelligence big-data health-informatics machine-learning named-entity-recognition
Language:Python 5
drseb / boqa
Bayesian ontology querying from Bauer et al.
hpo phenotype similarity bayesian-inference phenotypes phenotyping phenotype-ontologies obofoundry
Language:Java 5
monarch-initiative / PhenoteFX
PhenoteFX
monarchinitiative hpo
Language:Java 5
willleeney / ugle
Python Framework for An Investigation into Unsupervised GNN Learning Environments
clustering community-detection gnns graph-neural-networks graphs hpo python unsupervised-learning
Language:Python 5
monarch-initiative / pyrophen
Pyrophen generates a FHIR Code system representing the Human Phenotype Ontology
hpo fhir-ig
Language:Java 4
Phenomics / annotation-simulator
Simulation of disease-phenotype annotation with imprecision and noise.
simulation annotation hpo omim deciper orphanet ontology disease
Language:Java 4

hpo

LiYangHart / Hyperparameter-Optimization-of-Machine-Learning-Algorithms

AgileRL / AgileRL

Western-OC2-Lab / Intrusion-Detection-System-Using-Machine-Learning

obophenotype / human-phenotype-ontology

b2ihealthcare / snow-owl

LGE-ARC-AdvancedAI / auptimizer

phenotips / phenotips

releaunifreiburg / WellTunedSimpleNets

jianzhnie / AutoTabular

GeneDx / phenopy

ncbi-nlp / PhenoTagger

goktug97 / bohb-hpo

monarch-initiative / loinc2hpo

TheJacksonLaboratory / loinc2hpoAnnotation

anergictcell / pyhpo

GeneDx / txt2hpo

mlr-org / mlr3mbo

drseb / HPO-translations

hyeonsangjeon / Hyperparameters-Optimization

releaunifreiburg / DPL

TheJacksonLaboratory / hpo-web

monarch-initiative / HpoTextMining

monarch-initiative / phenopacket-store

releaunifreiburg / DyHPO

Phenomics / ontolib

umcu / dutch-medical-concepts

davetang / human_phenotype_ontology

drseb / HPO-archive

automl / arlbench

Human-Phenotype-Ontology / Human-Phenotype-Ontology.github.io

demoronator / DiagnosisAssistant

drseb / boqa

monarch-initiative / PhenoteFX

willleeney / ugle

monarch-initiative / pyrophen

Phenomics / annotation-simulator