gbif
There are 2 repositories under gbif topic.
- Language:R 155
- Language:R 117
- Language:Python 111
BelgianBiodiversityPlatform / python-dwca-reader
🐍 A Python package to read Darwin Core Archive (DwC-A) files.
Language:Python 45ropensci-archive / scrubr
:warning: ARCHIVED :warning: Clean species occurrence records
Language:R 34- Language:Julia 19
ChrKoenig / Big_Data_Ecology
Materials for the Workshop "Big Data Ecology"
Language:R 18- Language:R 18
trias-project / checklist-recipe
Template repository for standardizing thematic species checklist data to Darwin Core using R
:warning: ARCHIVED :warning: Read Darwin Core Archive files
Language:R 17inbo / data-publication
🔓 Open biodiversity data publication by the INBO
Language:HTML 16liibre / Rocc
Get species occurrence data from speciesLink and GBIF, and species lists from the Brazilian Flora 2020. Perform basic taxonomic checks based on Brazilian Flora 2020. Download GADM, WDPA and DIVA-GIS gazetteer shapefiles.
Language:R 16gbif / rs.gbif.org
GBIF machine-readable resources
Language:Python 13living-atlases / la-toolkit
This toolkit facilitates the installation, maintenance and monitor of Living Atlases portals
Language:Dart 12- Language:R 10
biodiversity-specimen-data / specimen-data-use-case
iDigBio API working group repository on obtaining biodiversity specimen data in R.
Language:HTML 9AntonelliLab / Bio-Dem
Explore the relations between biodiversity knowledge and different dimensions of democracy across the globe
Language:JavaScript 8- Language:HiveQL 8
riparias / gbif-alert
GBIF Alert is a GBIF occurrence based alert system.
Language:Python 8MoultDB / taxonbridge
R package to merge the NCBI taxonomy and the GBIF backbone taxonomy
Language:R 7GBIF-Europe / nordic_oikos_2018_r
Scientific reuse of openly published biodiversity information: Programmatic access to and analysis of primary biodiversity information using R. Nordic Oikos 2018, pre-conference R workshop. Venue: 18. feb. 2018 10:00 - 19. feb. 2018 16:00, Trondheim
Language:HTML 5- BIRDS
GreenswayAB / BIRDS
:mag_right: :bird: A set of tools for Biodiversity Informatics in R
Language:HTML 5 NaturalHistoryMuseum / ckanext-gbif
A CKAN extension that that connects with the GBIF API.
Language:Python 4- Language:Ruby 4
victoriaarevalor / Protocolo-y-Procedimientos-para-la-Gestion-de-BDB-enfocado-en-Colecciones-Botanicas
El protocolo tiene como finalidad entregar las herramientas necesarias para que instituciones que albergan datos de biodiversidad, puedan compartirlos de forma abierta con la comunidad, de esta manera se ayuda a visibilizar colecciones e instituciones, además da opción a ser un aporte al conocimiento ciudadano y científico global, permitiendo ayudar a la toma de decisiones con los distintos usos que se le puedan dar a estos datos, a través de la plataforma GBIF. Además incluye desde cómo organizar la información para crear una base de datos, llevarla a un lenguaje estandarizado para que de esta forma pueda ser comprendida por quien revise o requiera la información, dando alternativas para mejorar la calidad de sus datos a través de herramientas de libre acceso.
AtlasOfLivingAustralia / la-pipelines
Living Atlas Pipelines extensions
🖥️ A preconfigured appliance for biodiversity informatics work.
- planning-cards
fieldmuseum / planning-cards
Card resources for GBIF planning exercises: 1) Mobilization; 2) Node Management
AnaAGG / Effects_of_Climatic_Change_on_Species_Distributions
In this repository you will find an analysis of how rising temperatures have affected the presence of species throughout the Iberian Peninsula.
Language:Jupyter Notebook 2- Language:Vue 2
rudibroekhuizen / docker-compose-explore
Explore a GBIF dataset using PostgreSQL and Grafana.
Language:PLpgSQL 2Smithsonian / GBIF-Issues-Explorer
Shiny app to explore issues in occurrence records from a GBIF DwC download
Language:R 2🗺 Occurrence cubes for non-native taxa in Belgium and Europe
