DataPLANT (nfdi4plants)

DataPLANT

nfdi4plants

Geek Repo

Services and infrastructures to support #FAIRData science and good data management practices within the plant basic research community. #NFDI.

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DataPLANT's repositories

Swate

Excel Add-In for annotation of experimental data and computational workflows.

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ARCCommander

Tool to manage your ARCs

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ARCtrl

Library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtime-agnostic contract systems.

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ARCitect

Cross-plattform app to create and manage ARCs.

nfdi4plants_ontology

An intermediate ontology for plants used by DataPLANT to fill the ontology gap

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Swobup

Swate DB update tool

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nfdi4plants.github.io

DataPLANT static website using Fornax

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Swate-templates

A collection of templates for Swate (https://github.com/nfdi4plants/Swate).

arc-validate

Home of all the tools and libraries to create and run validation of ARCs

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ARCTokenization

Definition of controlled vocabulary tokens and library to tokenize ARC metadata into these tokens

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ARCtrl.NET

This library contains reader functions to interact with the different formats present in an ARC

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ARC_ontology

Repository containing the ARC ontology (currently only ISA-JSON model; cwl is wip (runs & workflows))

nfdi4plants.knowledgebase

This is the source repo for the nfdi4plants knowledge base webpage.

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actions-workflows

reusable github actions tailored for our needs

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arc-validate-package-registry

A repository of validation packages for ARCs

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DataHUB

This repository may be used to collect issues, bugs or similar regarding the DataPLANT DataHUB.

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dataplan

DataPLAN is the Data Management Plan (DMP) generator developed in DataPLANT

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archigator-backend

Archigator, a publicaton tool from Gitlab to Invenio

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git-build

Git Source Code Mirror - This is a publish-only repository but pull requests can be turned into patches to the mailing list via GitGitGadget (https://gitgitgadget.github.io/). Please follow Documentation/SubmittingPatches procedure for any of your improvements.

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