openscience

There are 9 repositories under openscience topic.

ethanwillis / zotero-scihub
A plugin that will automatically download PDFs of zotero items from sci-hub
openscience zotero scihub
Language:TypeScript 3259
CenterForOpenScience / osf.io
Facilitating Open Science
openscience science python javascript django django-rest-framework
Language:Python 663
nsidc / earthaccess
Python Library for NASA Earthdata APIs
access climate-data cloud-computing cmr data gis nasa nasa-api nasa-data open-science openscience pangeo remote-sensing
Language:Python 355
openPMD / openPMD-api
:floppy_disk: C++ & Python API for Scientific I/O
openpmd openscience hdf5 adios mpi hpc research file-handling python3 opendata metadata cpp17
Language:C++ 133
CenterForOpenScience / ember-osf-web
Ember front-end for the Open Science Framework
ember javascript openscience osf science
Language:TypeScript 118
expyriment / expyriment
Platform-independent lightweight Python library for designing and conducting timing-critical behavioural and neuroimaging experiments
python-library psychology psychology-experiments neuroscience openscience opensesame science neuroimaging-experiments experiment-control stimulus-presentation cognitive-science
Language:Python 114
CenterForOpenScience / SHARE
SHARE is building a free, open, data set about research and scholarly activities across their life cycle.
metadata scholarly-communication science openscience python elasticsearch data harvest-data
Language:Python 98
openml / openml-r
R package to interface with OpenML
openml cran r dataset database machine-learning reproducible-research open-data data-science datasets opendata open-science openscience machine-learning-algorithms statistics classification regression benchmarking benchmarking-suite arff
Language:Jupyter Notebook 95
openPMD / openPMD-standard
:notebook: Open Standard for Particle-Mesh Data
openpmd openscience fileformat community research document standardization
78
MouseLand / stringer-pachitariu-et-al-2018b
Responses of 10,000 neurons to 2,800 natural images
neuroscience openscience vision-science
Language:MATLAB 65
CenterForOpenScience / waterbutler
WaterButler is a Python web application for interacting with various file storage services via a single RESTful API, developed at Center for Open Science.
async openscience python science storage-provider tornado
Language:Python 61
openPMD / openPMD-viewer
:snake: Python visualization tools for openPMD files
community jupyter-notebook openpmd openscience research visualization
Language:Python 60
modenaxe / msk-STAPLE
STAPLE (Shared Tools for Automatic Personalised Lower Extremity modelling) consists of a collection of methods for generating skeletal models from three-dimensional bone geometries, usually segmented from medical images. The methods are currently being expanded to create complete musculoskeletal models.
biomechanics bone-geometries lower-limb-models openscience kinematics kinetics bone-morphological-analysis science computational-biology computer-science skeleton
Language:MATLAB 53
aokellermann / nexus-now
Access scientific literature in your browser using standard template construct, an IPFS-backed website for nexus search.
browser-extension chrome-extension edge-extension firefox-addon firefox-extension nexus-search open-access openscience standard-template-construct webextension
Language:JavaScript 48
MouseLand / stringer-pachitariu-et-al-2018a
Recordings of 10k neurons during spontaneous behaviors
neuroscience openscience
Language:MATLAB 47
scarsellifi / open-notebook-science
questo corso è stato pensato per gli studenti di Scienze Politiche dell'Università di Firenze. Questa sezione su github si concentra sull'utilizzo dell'ecosistema python per la Data Science. Slide del corso: https://docs.google.com/presentation/d/16WcexHHC8xK5Z1YE3tiBHRfBD46Y7bT4sn5viGUBPqs/edit?usp=sharing
openscience opennotebookscience
Language:Jupyter Notebook 41
4Science / DSpace
This repository contains the 4Science optimized DSpace & DSpace-CRIS distribution.
dspace cris rims cerif openscience
Language:Java 40
APPIAN-PET / APPIAN
APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET tracer kinetic data analysis easy for users with moderate computing skills and to facilitate reproducible research.
neuroscience neuroimaging pipeline automation reproducible-research openscience
Language:JavaScript 38
amnh / HackTheDeep
The 4th Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program
museum openscience hackathon openglam science oceanography marine-biology marine-evolutionary-ecology
Language:MATLAB 36
community
singlesourcepub / community
A community site around scholarly single source publishing #SiSoPub
publishing openscience single-source
35
website
FreeOurKnowledge / website
Project Free Our Knowledge aims to organise collective action in support of open and reproducible research practices. This repository is used to design new campaigns (using the issues feature) and to build the website (www.freeourknowledge.org).
research openscience academia
Language:HTML 34
amnh / HacktheDinos
The 2nd Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program
museum openscience science dinosaurs paleontology paleobiology openglam hackathon
Language:Python 33
amnh / HackTheStacks
The 3rd Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program
museum openscience science openglam libraries archives anthropology hackathon
32
OpenScienceMOOC / Main
Management materials and content
openscience research education mooc training roadmap management-materials
Language:HTML 31
UVA-DSI / Open-Data-Lab
an initiative to provide infrastructure for reproducible workflows around open data
opendata open-data open-research open-research-data open-research-experiments workflows openscience open-science datascience data-science discoverability fair-data fair-principles reproducibility open-education reference-data
Language:Jupyter Notebook 27
CommonGarden / Grow-IoT
Software packages for smart growing environments.
iot nodejs meteor iot-framework react webcomponents embedded-systems bioinformatics openscience
Language:JavaScript 25
ropensci-archive / roweb2
:no_entry: ARCHIVED :no_entry:
website opensource openscience hugo
Language:HTML 25
amnh / HackTheSolarSystem
The 5th Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program
museum openscience hackathon openglam science earth-science planetary-science meteorites comets mars venus jupiter solar-system
Language:IDL 22
colrev
CoLRev-Environment / colrev
CoLRev: An open-source environment for collaborative reviews
research literature systematic-literature-review systematic-review reproducible-research openscience open-science
Language:Python 21
VLucet / rgovcan
Easy access to the Canadian Open Government Portal
r openscience canada package api-wrapper
Language:R 21
OpenScienceMOOC / site
The OpenScienceMOOC website
openscience opensource opendata openaccess freesoftware mooc
Language:SCSS 20
gladstone-institutes / Interactive-Enrichment-Analysis
A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
bioinformatics enrichment-analysis foss openscience shiny
Language:R 19
openresearchcalendar.github.io
openresearchcalendar / openresearchcalendar.github.io
Documentation & Code for the community tool: 'Open Research Calendar'
openresearch openscience twitter-bot googlescript calendar hacktoberfest hacktoberfest2023
Language:HTML 18
oxinabox / DataDepsGenerators.jl
Utility for developers to help define DataDeps registration blocks, for reusing existing Data with DataDeps.jl
openscience opendata data-management
Language:Julia 18
holmos-mikroskop / holmos
Selbstbau eines digital-holographischen Mikroskops — Anleitungen, 3D-druckbare Bauteile und Code zur Nutzung auf einem Raspberry Pi
openscience holography microscope diy science raspberry-pi python
16
open-neuroscience / open-neuroscience.github.io
new implementation of Open Neuroscience website
neuroscience openscience
Language:Jupyter Notebook 15

openscience

ethanwillis / zotero-scihub

CenterForOpenScience / osf.io

nsidc / earthaccess

openPMD / openPMD-api

CenterForOpenScience / ember-osf-web

expyriment / expyriment

CenterForOpenScience / SHARE

openml / openml-r

openPMD / openPMD-standard

MouseLand / stringer-pachitariu-et-al-2018b

CenterForOpenScience / waterbutler

openPMD / openPMD-viewer

modenaxe / msk-STAPLE

aokellermann / nexus-now

MouseLand / stringer-pachitariu-et-al-2018a

scarsellifi / open-notebook-science

4Science / DSpace

APPIAN-PET / APPIAN

amnh / HackTheDeep

singlesourcepub / community

FreeOurKnowledge / website

amnh / HacktheDinos

amnh / HackTheStacks

OpenScienceMOOC / Main

UVA-DSI / Open-Data-Lab

CommonGarden / Grow-IoT

ropensci-archive / roweb2

amnh / HackTheSolarSystem

CoLRev-Environment / colrev

VLucet / rgovcan

OpenScienceMOOC / site

gladstone-institutes / Interactive-Enrichment-Analysis

openresearchcalendar / openresearchcalendar.github.io

oxinabox / DataDepsGenerators.jl

holmos-mikroskop / holmos

open-neuroscience / open-neuroscience.github.io