blast-searches

There are 0 repository under blast-searches topic.

• drostlab / orthologr

  Genome wide orthology inference and dNdS estimation

  blast-searchesorthology-inferencecomparative-genomics-studiesgenomicssequence-alignmentsblastcomparativednds-estimationcodon-alignmentrentire-genomesorthologous-genesbiomartrspeciescomparing-genomesgenomics-studiesretrieve-genomescomparative-genomicsproteomesequence-alignment
  Language:R 86

• seqan / lambda

  LAMBDA – the Local Aligner for Massive Biological DatA

  bioinformaticsblastblast-searchesncbi-taxonomyalignmentmetagenomicsprotein-sequenceshigh-performanceseqan
  Language:C++ 77

• drostlab / metablastr

  Seamless Integration of BLAST Sequence Searches in R

  blast-searchesblastblastnblastingsequence-diversitybiological-sequencesbiomartrspeciesnucleotideblast-hitsblast-searchprotein
  Language:R 31

• Azure / azure-hpc

  Microsoft Azure HPC & Big Compute

  azure-hpcazure-storagebioinformaticsblastblastnblast-searchesblast-searchlifescienceresearch
  Language:JavaScript 14

• pgdurand / BlastViewer

  This package contains the BLAST Viewer Tool.

  blast-searchesbioinformatics-pipelineinterproscangene-ontology
  Language:Java 13
• DIGS-tool

  giffordlabcvr / DIGS-tool

  Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.

  sequence-similaritysimilarity-searchblast-searchesevolutionmolecular-geneticscomparative-genomicsgenome-miningdark-genome
  Language:Perl 10

• pcantalupo / annotater

  Annotate sequences by BLAST using NCBI taxonomy information

  blastblast-searchesncbi-blastncbi-taxonomytaxonomic-classificationstaxonomy
  Language:Perl 6

• blinard-BIOINFO / NCBITaxonomy

  Tools to build a copy of the NCBI Taxonomy database in a local SQL schema and query it via a Java package.

  blastblast-searchesncbispecies-liststaxidtaxonomy
  Language:Java 4

• pranavkhurana / Seabuck-thorn

  This is a simple implementation of NCBI's BLAST(Basic Local Alignment Search Tool) url API in PHP. Blast finds regions of similarity between biological sequences.

  phpblast-searchesblast-url-apiblastnncbi-blastseabuck-thorn
  Language:PHP 2

• ifremer-bioinformatics / BLAST-PLAST-bench

  Scripts to run benchmarks of BLAST and PLAST on a supercomputer

  blast-searchesblastpblastxblastnmegablastsupercomputerprotein-sequencesgene-sequencesplast
  Language:Shell 0