Ifremer - SeBiMER Bioinformatics Tools

Ifremer - SeBiMER Bioinformatics Tools's repositories

Standardized and Automated MetaBarcoding Analyses workflow (Mirror)

Language:NextflowMIT11 3 5

Workflow for prOteome and tRanScriptome functiOnal aNnotation. CAUTION : project has moved to Gitlab.

Language:NextflowMIT5 3 1

A FAIR toolkit for fast visualization of omics data and metadata

Language:JavaScript4 30

Dynamic visualization of softwares managed by a Bioinformatics Core Facility

Language:PythonApache-2.04 30

Language:PythonAGPL-3.02 40

Language:NextflowAGPL-3.02 4 1

workFLOw for Rnaseq analyses of the Amocyst project

Language:NextflowMIT1 20

Scripts to run benchmarks of BLAST and PLAST on a supercomputer

Language:Shell030

public web site of SeBiMER on Github

Language:JavaScript01 1

Keshif - Data Made Explorable (Prototype)

Language:JavaScriptBSD-3-Clause010

Sequence management tools relying on the Bioinformatics Databank Manager System, BeeDeeM (miror).

Language:JavaAGPL-3.0030

The Katalog library aims at displaying list of softwares (or databanks) using facetted data visualization system

Language:JavaScriptBSD-3-Clause050