Rob J. Gifford Lab

gluetools

An open, platform-independent software toolkit for storage and interpretation of sequence data, implemented in Java.

DIGS-tool

Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.

A3-Evolution

Resources supporting comparative and phylogenetic analysis of APOBEC3 genes

COV-GLUE

A GLUE project for SARS-COV2, focused on genetic variation.

Flavivirus-GLUE

A GLUE project for comparative genomic analysis of flaviviruses

Flu-GLUE

A GLUE project for influenzaviruses

HBV-GLUE

A GLUE project for hepatitis B virus (HBV).

HCV-GLUE

A GLUE project for Hepatitis C virus (HCV)

NCBI-HBV-GLUE

Extension to HBV-GLUE - incorporates all sequences from GenBank.

Parvovirus-GLUE

A GLUE project for comparative genomic analysis of parvoviruses

BTV-GLUE

A GLUE project for Bluetongue Virus

CRESS-GLUE

A GLUE project for comparative genomic analysis of circular Rep-encoding single-stranded DNA (CRESS DNA) viruses

RABV-GLUE

A GLUE project developed to support genomic surveillance of Rabies Virus (RABV).

CHIKV-GLUE

A GLUE project for chikungunya virus (CHIKV)

COV-GLUE-WEB

Web application for COV-GLUE

Deltaretrovirus-GLUE

A GLUE project for Deltaretroviruses

Dengue-GLUE

A GLUE project for dengue virus (DENV)

DIGS-for-EVEs

An organised catalogue of endogenous viral element (EVE) sequences identified via database-integrated genome screening (DIGS).

Filovirus-GLUE

A GLUE project for comparative genomic analysis of filoviruses

Flu-H5N1

HBV-GLUE-WEB

Web application for HBV-GLUE

Hepadnaviridae-GLUE

A GLUE project for hepadnaviruses (family Hepadnaviridae)

HEV-GLUE

A GLUE project for Hepatitis E Virus (HEV)

HHV6-GLUE

A GLUE project for human herpesvirus 6 (HHV6)

Lassa-GLUE

A GLUE project for Lassa virus

Lentivirus-GLUE

A GLUE project for Lentiviruses (genus Lentivirus)

NCBI-HCV-GLUE

Extension to HCV-GLUE - contains all published HCV data from NCBI, plus analysis logic for HCV genomes.

NCBI-RABV-GLUE

Extension to RABV-GLUE capturing NCBI data.

RABV-GLUE-WEB

public interactive website layered on top of RABV-GLUE / NCBI-RABV-GLUE projects.

YFV-GLUE

A GLUE project for yellow fever virus (YFV)