There are 1 repository under scverse topic.
Deep probabilistic analysis of single-cell and spatial omics data
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
A single cell transcriptomics pipeline for QC, integration and making the data presentable
Tutorials for multimodal omics data analysis
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData
Scripts/Notebooks for "Training models on atlas-scale single-cell datasets" at scverse Conference 2024
Feature-rich Python implementation of the tximport package for gene count estimation.
Awesome GRN enhanced AnnData toolkit
A Python alternative to `clustree` for assessing single-cell RNA-sequencing clusters.
Dimensionality reduction and interactive web visualization for the scverse 2024 conference