multiome

There are 0 repository under multiome topic.

gtca / chame
Chromatin analysis module
atac-seq chromatin genome multiome ranges scatac-seq scverse
Language:Python 4
PMBio / mudatasets
Multimodal datasets, in MuData format
multimodal-omics multi-omics scrna-seq multiome muon mudata anndata scanpy
Language:Python 3
ParkerLab / 2021_islet-rfx6
Code for Walker, Saunders, Rai et al., (2021).
islets single-cell multiome integrative-analysis gwas atac-seq rna-seq codex wgcna rfx6 pancreas alpha-cell beta-cells
Language:Roff 2
razofz / DB_AKC_citeseq
Accompanying code for analysis of manuscript in Nature Aging: Implications of stress-induced gene expression for hematopoietic stem cell aging studies
bioinformatics cite-seq jupyter multiome quarto rna-seq
Language:HTML 0
razofz / DB_QZ_multiome
Multiome (RNA+ATAC from same cell) data generated by Qinyu Zhang in David Bryder's lab. Paper here: https://doi.org/10.7554/eLife.91826.2
atac-seq multiome python r rna-seq snakemake seurat variational-autoencoder
Language:Python 0
hisplan / wdl-cellranger-arc
WDLized Cell Ranger ARC
cellranger-arc wdl multiome single-cell workflow pipeline
Language:WDL

gtca / chame