qtl-mapping

There are 0 repository under qtl-mapping topic.

• lizhao007 / DeepBSA

  DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.

  bsadeep-learningqtl-mappingsoftware
  14

• YaoLab-Bioinfo / binQTL

  QTL mapping with binmap data

  qtlbinmapqtl-mapping
  Language:R 14

• colbyford / parEBEN

  Parallel Implementations of the Empirical Bayesian Elastic Net Cross-Validation in R

  epistasisrregularizationbayesian-inferencegenomicsepistasis-analysisqtl-mappingcross-validationregression-modelselastic-netsparallelalgorithm
  Language:C 5

• gabrielgesteira / QTLpoly

  R package for random-effect multiple QTL mapping in autopolyploids

  polyploidqtl-mapping
  Language:R 5

• ladyson1806 / SerohijosLab-piQTL

  GitHub Repository associated with the piQTL project (Mapping effects of genome-wide genetic variation to protein-protein interactions reveals molecular mechanisms of complex traits) [ Serohijos & Michnick Lab, Université de Montréal ]

  bioinformaticsbiological-networksgwasomics-data-integrationpopulation-geneticsprotein-protein-interaction-networkqtl-mappingsystems-biologyyeastgene-interaction-network
  Language:Jupyter Notebook 4

• bredeson / Dioscorea-alata-genomics

  Code and data from the Bredeson, Lyons, et al. Dioscorea alata var. TDa95/00328 v2 genome and analysis manuscript.

  bioinformaticsgenomicspopulation-genomicsqtl-mappingevolution
  Language:R 3

• fboehm / qtlbim

  QTL Bayesian Interval Mapping

  qtl-mappingbayesianqtl
  Language:R 3

• kentavv / mapmaker

  MapMaker/Exp 3.0b and MapMaker/QTL 1.1, updated to add various improvements including multithreading

  qtlqtl-mappingqtl-analysesgenetic-analysis
  Language:C 3

• alethere / mpQTL

  github repository for R package mpQTL

  haplotypepolyploidyqtl-mapping
  Language:R 2

• YaoLab-Bioinfo / binQTL.shiny

  GUI for binQTL

  qtlbinmapshiny-applicationsshinyqtl-mapping
  Language:R 2
• UVIC_TFM_AGomez_2023

  antoniogomez / UVIC_TFM_AGomez_2023

  Scripts of Final Master Project

  eqtlgwas-toolsmirna-seqqtlqtl-analysesqtl-mapping
  Language:R 1

• czheluo / Polymap

  Pipeline for polymap and QTL Mapping

  qtl-mappinggenetic-mappingngs-pipeline
  Language:R 1

• ManuelDelpero / AIL_B6xBFMI

  Analysis code for AIL B6xBFMI

  geneticsbioinformaticsqtl-mapping
  Language:R 1

• ramesh8v / chad_db-BRIL

  Wheat BRIL database created using FLASK server side, angularjs is heavily used at front end

  flaskangularjswheatbrilqtl-mappingsnp-genotyping
  Language:Python 1

• villegar / MetaPipe

  MetaPipe: A High-Performance Computing pipeline for QTL mapping of large metabolomic datasets

  qtl-mapping
  Language:R 1

• arunkumarramesh / Drosophila-genetic-mapping

  To map Drosophila melanogaster gene region(s) containing resistance to infection by parasitic wasp Leptopilina boulardi.

  drosophila-melanogastergenetic-mappinginterval-mapleptopilina-boulardiqtl-mappingbackcross
  Language:R 0

• Biometris / statgenMPP

  See https://biometris.github.io/statgenMPP for a full description

  crangeneticsqtl-mappingr-packagempp
  Language:R 0

• danielalfonsetti / JAXSSP_Aging_Heart

  Jackson Labs Summer Student Program 2018, Bar Harbor, ME. Statistically analyzing the effect of genetic diversity on the aging heart. Final paper: https://docs.google.com/document/d/1rkDRjnS6XhkFGk6EpzB4V24XqJdfN_JaM4vh5cc3iBA/edit

  genomicscomputational-biologyagingheartqtl-mapping
  Language:R 0

• erisemberg / peanut-allergy

  This repository contains data and code to reproduce analysis in the manuscript, "A mutation in Themis contributes to peanut-induced oral anaphylaxis in CC027 mice"

  geneticsqtl-mappingquantitative-geneticsstatistical-models
  Language:R 0
• Brassica-Report-R

  miggyboy96 / Brassica-Report-R

  Project for my module Big Data Biology.

  biology-projectqtl-mapping
  Language:R 0

• ramesh8v / tools

  Repository for genomic webapplications served from GitHub pages

  wheatwheat-genomeqtl-mappingconsensus-mappingmetaqtl
  Language:JavaScript 0

• ulrichga / Lfab_QTL

  Analyses of my MSc Thesis: "Genetic architecture of parasitoid counteradaptation to symbiont-conferred resistance"

  biologyqtl-mappinggeneticsevolutionbioinformaticsrbashgenomicslinkage-mapping
  Language:R 0

• yassato / rNeighborQTL

  To enable quantitative trait loci mapping of neighbor effects, this package extends a single-marker analysis to interval mapping.

  rqtl-mapping
  Language:R 0

• zjwinn / Mapping-of-a-Novel-Major-Effect-Hessian-Fly-Partial-Resistance-Locus-in-Southern-SRWW-LA03136E71

  Data repository for the paper of the same name.

  geneticsgenotypingplant-breedingplant-breeding-datapublication-codeqtl-mappingr-code
  0

• zjwinn / Winn-Dissertation-Chapter-3

  This is the public repository for information related to the thesis chapter of the same name as the title.

  qtlqtl-mapping
  0

• jlboat / hapmap_to_qtl2

  Convert HapMap file into a useable R qtl2 genotype file

  hapmappythonqtl-analysesqtl-mapping
  Language:Python

• matmu / MouseFM

  In-silico methods for finemapping of genetic regions in inbred mice

  mouseqtlqtl-mappingfinemapgene-candidatesinbred-strainsinbred-mice
  Language:R