plant-breeding

There are 1 repository under plant-breeding topic.

BrAPI
plantbreeding / BrAPI
Repository for version control of the BrAPI specifications
brapi apiary swaggerhub plant-breeding swagger open-api-v3 data-management api specification standard brapi-germplasm brapi-genotyping brapi-phenotyping brapi-server
Language:Python 53
AparicioJohan / agriutilities
lmm plant-breeding met-analysis
Language:R 17
MMFAIR
SchmidtPaul / MMFAIR
:chart_with_upwards_trend::seedling: Mixed Models for Agriculture in R
agriculture glmmtmb lifescience lme4 mixed-models nlme plant-breeding sas sommer
Language:HTML 15
adamavip / nirs-protein-prediction
We present here a 1D convolutional neural network model to predict grain protein content using spectroscopic data of multiple cereals
machine-learning deep-learning auto-ml nirs statistical-modeling plant-breeding plant-phenotyping
Language:Jupyter Notebook 10
adamavip / multitrait-nirs-model
Modeling of nutritional traits from multiple crops using NIRS and machine learning/statistics
deep-neural-networks signal-processing machine-learning-algorithms data-augmentation data-preprocessing nutrition plant-breeding
Language:Python 6
Flavjack / inti
Tools and Statistical Procedures in Plant Science
plant-breeding lmm apps shiny agriculture plant-science cran r-package inkaverse
Language:R 6
adamavip / fatty_acid_nirs_model
Using near-infrared spectroscopy (NIRS) and machine learning to determine oleic acid content from peanut raw grains
machine-learning deep-learning nirs data-preprocessing data-augmentation plant-breeding
Language:Python 5
SchmidtPaul / crashcouRse
:chart_with_downwards_trend::seedling: R für Bio- und Agrarwissenschaftler
lifescience mixed-models quantitative-analysis agriculture plant-breeding rstudio biostatistics
Language:HTML 5
igorkf / Maize_GxE_Prediction
Using machine learning to integrate genetic and environmental data to model genotype-by-environment interactions
genomic-prediction gxe maize ml plant-breeding python r
Language:Python 4
mishaploid / carrot-diallel
Diallel analysis of carrot phenotypes
diallel carrot bayesian-statistics quantitative-genetics plant-breeding plant-genetic-resources
Language:R 4
zankrut20 / selection.index
Analysis of Selection Index in Plant Breeding
agriculture animal-science cran plant-breeding r selection-index selection-indices smith-selection-index rstudio
Language:R 2
igorkf / gen-papers
List of papers related to Agricultural Statistics, Plant Breeding, and Quantitative Genetics
genomic-prediction machine-learning plant-breeding quantitative-genetics statistics
1
cropgeeks / brapi-java
A Breeding Api (BrAPI) implementation written in Java. Contains all data objects, client and server interfaces for all modules.
brapi plant-breeding java
Language:Java 0
matthijsbrouwer / brapi-proxy
BrAPI proxy solution
brapi plant-breeding proxy rest-api
Language:Python 0
mchizk1 / UA_Fruit_Breeding
This repository serves to document, share, and collaborate on scripts used in the University of Arkansas fruit breeding lab.
horticulture bioinformatics research plant-breeding phenotyping polyploid
Language:R 0
RaafatA / PopAllele
PopAllele encodes and decode the genetic distribution of alleles within populations
combine molecular-markers plant-biology plant-breeding qrcode
Language:Python 0
zjwinn / Mapping-of-a-Novel-Major-Effect-Hessian-Fly-Partial-Resistance-Locus-in-Southern-SRWW-LA03136E71
Data repository for the paper of the same name.
genetics genotyping plant-breeding plant-breeding-data publication-code qtl-mapping r-code
0
dabne003 / Unsupervised-Machine-Learning
Principal Component Analysis, PCA, Gaussian Markov Random Fields, Graphical model,
principal-component-analysis pca unsupervised-machine-learning guassian-markov-random-fields graphical-models clustering-hierarchy snp-data snps phenotypes plant-breeding
Language:R
maeslopezortiz / GradientBoostingRegressor
Gradient Boosting Regression (GBR, https://github.com/scikit-learn/scikit-learn) model for genomic predictions
genomic-prediction machine-learning plant-breeding python
Language:Python