ms-data

There are 3 repositories under ms-data topic.

OpenMS / OpenMS
The codebase of the OpenMS project
3-clause-bsd algorithms analyses c-plus-plus hacktoberfest linux macos mass-spectrometry metabolomics ms-data openms proteomics windows
Language:C++ 526
philosopher
Nesvilab / philosopher
PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering
bioinformatics proteomics mass-spectrometry ms-data go data-analysis
Language:Go 115
sirius-ms / sirius
SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)
bioinformatics cheminformatics csi-fingerid denovo fingerid fragmentation-trees isotope-pattern java mass-spectra mass-spectrometry metabolomics molecular-formulas molecular-structures ms-data ms-spectra science sirius structure-elucidation
Language:Java 103
sirius-ms / sirius-libs
sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java
bioinformatics cheminformatics denovo java-library mass-spectrometry metabolomics molecular-formulas ms-data ms-spectra scientific-computing
Language:Java 52
AutoFlowResearch / SmartPeak
Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing
mass-spectrometry ms-data analyses biotechnology lc-ms lc-msms gc-ms bioinformatics biotech
Language:C++ 48
OpenMS / pyopenms-docs
pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
openms python ms-data hacktoberfest hacktoberfest2022
Language:Python 47
ursgal / ursgal
Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
proteomics peptide-identification python mass-spectrometry ms-data proteomics-data mzml omics
Language:Python 42
pyQms / pyqms
pyQms, generalized, fast and accurate mass spectrometry data quantification
mass-spectrometry proteomics metabolomics lipidomics computational-biology ms-data
Language:Python 28
MetaSys-LISBP / IsoCor
IsoCor: Isotope Correction for mass spectrometry labeling experiments
ms-data isotope-labeling-experiments isotope mass-spectrometry metabolomics isotope-correction fluxomics 13c-mfa metabolic-flux-analysis correction-natural-abundance isotopologue-distribution isotopic-inchi
Language:Python 24
novak-jiri / cyclobranch
A tool for mass spectrometry data analysis.
mass-spectrometry mass-spectrometry-imaging bioinformatics bioinformatics-tool peptides peptide-identification mzml imzml ms-data lc-ms maldi-msi desi-msi image-fusion imaging metabolomics dereplication de-novo
Language:C++ 10
glyXera / glyXtoolMS
🐍 Open-Source Software for the semi-automated analysis of glycopeptide mass spectrometry data
open-source mass-spectrometry openms glycoproteomics ms-data bioinformatics python
Language:Python 6
MetaSys-LISBP / IsoQ
Simultaneous measurement of absolute metabolite concentration and isotope incorporation by mass spectrometry
13c-mfa fluxomics isotope isotope-labeling-experiments isotopologue-distribution mass-spectrometry metabolic-flux-analysis metabolomics ms-data
Language:Python 2