There are 0 repository under lipidomics topic.
Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidomics, exposomics, and environmental studies.
Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of metabolites) in R.
LipidLynxX provides the possibility to convert, cross-match, and link various lipid annotations to the tools supporting lipid ontology, pathway, and network analysis aiming systems-wide integration and functional annotation of lipidome dynamics in health and disease.
A collection of awesome lipidomics tools and resources
Goslin is the Grammar on succinct lipid nomenclature.
Git repository for the R package "LOBSTAHS" (Lipid and Oxylipin Biomarker Screening Through Adduct Hierarchy Sequences)
This project aims at defining a set of guidelines for reproducible mass spectrometry-based experiments.
LipidHunter is capable to perform bottom up identification of lipids from LC-MS/MS and shotgun lipidomics data by resembling a workflow of manual spectra annotation. LipidHunter generates interactive HTML output with its unique six-panel-image, which provides an easy way to review, store, and share the identification results.
R package for Profiling and Differential expression Analysis of Lipidomic Datasets
Galaxy tools for Python package DIMSpy: data processing of Direct-Infusion Mass Spectrometry-based metabolomics and lipidomics data
Java implementation of the latest shorthand nomenclature.
The R-language bindings for mzTab-M
Functions and a Shiny app to correct class-based separation LC-MRM-MS lipidomics data for isotopic interferences
A DMS Shotgun Lipidomics Workflow Application to Facilitate High-Throughput, Comprehensive Lipidomics
Collection of scripts for improving lipid constraints in yeast-GEM
Repository for metabolomics and lipidomics data processing app.
Python implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
pyLFDA is a tool which allows analysis of pairwise lipid force distribution along with other functions such as curvature and diffusion.
ADViSELipidomics is a novel Shiny app for the preprocessing, analysis, and visualization of lipidomics data.
This repository contains codes I wrote mostly in R to perform various kinds of analysis of multi-omics datasets.
This is a lipidomics only version of iSODA from NDCN.
This repository contains the script used to study blood pro-resolving mediators as biomarkers to predict the response of DMARD treatment in rheumatoid arthritis patients
Core scripts for FluoroMatch, LipidMatch, and PolyMatch