dereplication

There are 0 repository under dereplication topic.

refresh-bio / vclust
Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes
average-nucleotide-identity bacteriophages clustering dereplication genome-sequence sequence-similarity taxonomic-classification viruses
Language:Python 42
novak-jiri / cyclobranch
A tool for mass spectrometry data analysis.
mass-spectrometry mass-spectrometry-imaging bioinformatics bioinformatics-tool peptides peptide-identification mzml imzml ms-data lc-ms maldi-msi desi-msi image-fusion imaging metabolomics dereplication de-novo
Language:C++ 10
JJChenCharly / OrthoSLC
OrthoSLC: A pipeline to get Orthologous Genes using Reciprocal Best Blast Hit (RBBH) Single Linkage Clustering, indenpendent of relational database management system
reciprocal-blast-hits single-linkage-clustering core-genome microbe-subspecies lightweight pre-compiled independent-of-mysql bioinformatics dereplication jupyter-notebook cpp-callable-binary convenient-installation large-dataset large-scale pan-genome genomics
Language:Jupyter Notebook 5
clzani / DEREP-NP
Repository for files related to DEREP-NP dereplication database
dereplication substructure derep-np database nmr-spectroscopy mass-spectrometry hsqc natural-products structure-elucidation medicinal-plants unpd datawarrior knime
4
maldipickr
ClavelLab / maldipickr
Dereplicate And Cherry-pick Mass Spectrometry Spectra
dereplication maldi-tof-ms cherry-pick r r-packages rstats
Language:R 2