frankkramer-lab

frankkramer-lab's repositories

MIScnn

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

Language:PythonGPL-3.0397 14 115

miseval

a metric library for Medical Image Segmentation EVALuation

Language:Jupyter NotebookGPL-3.0100 3 10

covid19.MIScnn

Robust Chest CT Image Segmentation of COVID-19 Lung Infection based on limited data

Language:PythonGPL-3.085 5 24

mully

R package to create, modify and visualize graphs with multiple layers.

Language:HTML45 9 6

aucmedi

a framework for Automated Classification of Medical Images

Language:PythonGPL-3.033 3 182

riadd.aucmedi

Multi-Disease Detection in Retinal Imaging based on Ensembling Heterogeneous Deep Learning Models

Language:PythonGPL-3.027 3 21

ensmic

An analysis on Ensemble Learning optimized Medical Image Classification with Deep Convolutional Neural Networks

Language:PythonGPL-3.017 2 67

GERNERMED

GERNERMED is the first open neural NER model for medical entities designed for German data.

Language:PythonMIT17 3 1

GPTNERMED

GPTNERMED is a language model-generated, synthetic dataset and an open neural NER model for medical entities designed for German data.

Language:Python15 2 1

ndexr

R client library for NDEx

Language:RBSD-3-Clause8 50

RCX

R package implementing the Cytoscape Exchange (CX) format

Language:HTMLMIT8 4 1

GERNERMED-pp

GERNERMED++ is a transfer-learning-based open neural NER model for medical entities designed for German data.

Language:Python7 2 1

Multipath

Integrating pathways and related knowledge in a multilayer framework

Language:R5 40

DrNote is an open tagging tool for text annotation and entity linking based on OpenTapioca and WIkiData/Wikipedia. It provides an entity linking service with pre-trained data for medical annotations in multilingual settings. The processing of raw text as well as PDF by a tesseract backend is supported.

Language:ShellApache-2.04 2 1