locuszoom

There are 1 repository under locuszoom topic.

statgen / locuszoom
A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
locuszoom gwas gwas-summary-statistics gwas-tools locuszoom-plot
Language:JavaScript 149
mmkim1210 / GeneticsMakie.jl
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
genetics genomics julia visualization makie bioinformatics cairomakie gwas phewas locuszoom colocalization fine-mapping qtl linkage julia-language data-science multi-ethnic v2f multivariate openmendel
Language:Julia 74
RajLabMSSM / ggLocusZoom
Create LocusZoom-style plots in R.
r echoverse gwas qtl plotting locuszoom fine-mapping
Language:R 20
swvanderlaan / GWASToolKit
A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.
variant-analyses gwas regional-analyses gene-analyses locuszoom manhattan qq
Language:Shell 15
RayDebashree / GWAStools
A curated list (with links) of useful tools for genome-wide association analysis.
gwas gwas-catalog manhattan-plot qqplot genome-analysis genetic-epidemiology gwas-tools locuszoom swiss meta-analysis metal emmax skat mmlr
9
naim-panjwani / LocusFocus
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
gwas gwas-tools gwas-summary-statistics eqtl eqtl-mapping gtex-eqtl-association mechanism-of-action cis-regulation locuszoom phewas fine-mapping
Language:JavaScript 8
statgen / localzoom
Make interactive LocusZoom plots from a local GWAS file
locuszoom locuszoom-plot gwas gwas-tools gwas-pipeline gwas-summary-statistics gwas-catalog
Language:Vue 7
krassowski / jupyter-locuszoom
LocusZoom in Jupyter notebooks
bioinformatics genetics genome-wide-association-studies gwas jupyter jupyterlab jupyterlab-extension locuszoom plink plink2
Language:TypeScript 4
jjsayleraxio / AxioLocusZoom
R ShinyApp HTMLWidget using the locuszoom.js library found at https://statgen.github.io/locuszoom/
shinyapp-htmlwidget locuszoom locuszoom-library
Language:JavaScript 2
abought / zorp
A simple GWAS parser + CLI
gwas-summary-statistics gwas-tools gwas-pipeline gwas parsers conversion python locuszoom
Language:Python 1
statgen / locuszoom-hosted
A web service to upload and share GWAS results with LocusZoom.js
locuszoom locuszoom-plot gwas gwas-summary-statistics gwas-pipeline gwas-tools
Language:Python 1
mmkim1210 / acne-genetics
💆🏻J’ai déjà toi
gwas locuszoom phewas
Language:Julia 0