gwas-catalog

There are 0 repository under gwas-catalog topic.

• ramiromagno / gwasrapidd

  gwasrapidd: an R package to query, download and wrangle GWAS Catalog data

  gwas-catalogrrest-clientsnptraittrait-ontologyhumanassociation-studies
  Language:R 88

• CaoTianze / pandasgwas

  pandasGWAS: a Python package for easy retrieval of GWAS Catalog data

  gwas-catalogpandasgwasrapidd
  Language:Python 10

• RayDebashree / GWAStools

  A curated list (with links) of useful tools for genome-wide association analysis.

  gwasgwas-catalogmanhattan-plotqqplotgenome-analysisgenetic-epidemiologygwas-toolslocuszoomswissmeta-analysismetalemmaxskatmmlr
  10

• statgen / localzoom

  Make interactive LocusZoom plots from a local GWAS file

  locuszoomlocuszoom-plotgwasgwas-toolsgwas-pipelinegwas-summary-statisticsgwas-catalog
  Language:Vue 7

• Genome3d / genetic_regulation_in_ASD

  Analysis of regulatory impacts of autism-associated SNPs on biological pathways in the fetal and adult cortex.

  autism-spectrum-disorderasdgwas-cataloggtex-resourcessnpseqtlgene-regulation
  Language:HTML 6

• jyu-theartofml / DNA_genotype_analysis

  Analysis of genotype data from 23andMe DNA testing.

  genotype23andmednagwas-catalogr
  Language:R 3

• arvkevi / gwas-wrapper

  Simple wrapper for the GWAS Catalog

  gwas-catalogsnp-associationsgenomicsbioinformatics
  Language:Python 2

• cfbeuchel / gwascatftp

  R package to access GWAS Catalog FTP data

  association-studiesftpgwasgwas-catalogrsummary-statistics
  Language:R 2

• dhimmel / gwas-catalog

  Extracting disease-gene associations from the GWAS Catalog

  gwasgwas-catalogsnpgenediseasedata-processingrephetiohetionet
  Language:Jupyter Notebook 2

• giovannicoppola / alfred-GWAS

  An Alfred workflow to browse the GWAS catalog

  alfredalfred-workflowgeneticsgwasgwas-catalog
  Language:Python 2

• sigven / gwasOncoX

  Cancer variant data from genome-wide association studies (GWAS)

  bedgwas-cataloggwas-datasetvcf
  Language:R 2

• tdayris-perso / vcf-annotate-snpeff-snpsift

  Snakemake workflow designed to annotate VCF files withe SnpEff / SniSift

  bioinformatics-pipelinedbnsfpgwas-catalogmsigdbreproducible-sciencesnakemake-workflowssnpeff
  Language:Python 2

• lightning-auriga / gwas-winners-curse

  tool for probabilistic correction of Winner's Curse in two-stage GWAS

  gwasgwas-cataloggwas-summary-statisticsr
  Language:R 1

• BreisOne / gene-mining

  EDA of different databases to extract IBD-relevant genes, their coverage in a 10X Genomics spatial transcriptomics panel and the main cell types and tissues related to these genes.

  cell-type-prioritizationdisgenetgene-disease-associationsgene-prioritizationgwas-catalog
  Language:Jupyter Notebook 0

• Genome3d / genetic_regulation_in_COPD

  De novo discovery of traits co-occurring with chronic obstructive pulmonary disease.

  copdeqtlgene-regulationcodes3dcomorbiditiesgwas-catalogmultimorbid3d
  Language:HTML 0

• maialab / hapiverse

  Easily install and load the hapiverse

  ebipgsgwasgwas-cataloggwasrapiddquincunxcintesisualg
  Language:R 0