peak-detection

There are 5 repositories under peak-detection topic.

raphaelvallat / yasa
YASA (Yet Another Spindle Algorithm): a Python package to analyze polysomnographic sleep recordings.
sleep sleep-analysis sleep-spindles signal-processing eeg-analysis stft deep-sleep peak-detection numba spectral-analysis eeg-signals sleep-staging sleep-stage-scoring sleep-scoring artefact-rejection
Language:Python 387
jdsp
psambit9791 / jdsp
A Java Library for Digital Signal Processing
signal-processing dsp java iir-filters savitzky-golay-filter matlab-style-filters butterworth-filter chebyshev-filter convolution fourier-transform hilbert-transform peak-detection android android-library windowing splines short-time-fourier-transform signal-processing-algorithms adaptive-filters speech
Language:Java 232
erdogant / findpeaks
The detection of peaks and valleys in a 1d-vector or 2d-array (image)
peak-detection mesh 3d-reconstruction topological-data-analysis topology mask peak-analysis denoising-images speckle-noise sar sonar
Language:Python 200
sneumann / xcms
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
bioconductor metabolomics mass-spectrometry peak-detection feature-detection r
Language:R 170
LiuLabUB / HMMRATAC
HMMRATAC peak caller for ATAC-seq data
atac-seq machine-learning peak-caller peak-detection sequencing
Language:Java 97
cbrnr / sleepecg
Sleep stage detection using ECG
python peak-detection ecg heartrate sleep-staging
Language:Python 75
tobiasrausch / ATACseq
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
atac-seq atac-seq-pipeline chromatin next-generation-sequencing nucleosome-positioning peak-detection sequencing
Language:Shell 71
JanCBrammer / biopeaks
A graphical user interface for feature extraction from heart- and breathing biosignals.
biosignals bitalino opensignals ecg breathing signal-analysis python gui heart peak-detection heart-rate breathing-rate edf electrophysiology ppg
Language:Python 59
leandcesar / PeakDetection
Real time peak detection with z-score for Arduino
arduino c c-plus-plus algorithm-signals arduino-library signal-processing detection peak-analysis peak-detection signal moving-average z-score
Language:C++ 55
avhn / peakdetect
Simple peak detection
analytics data-analysis peak-detection
Language:Python 50
antimattercorrade / Pan_Tompkins_QRS_Detection
Pan Tompkins QRS Wave Detection Algorithm Python Implementation
python python3 jupyter-notebook pan-tomkins-qrs-detection pan-tompkins heart-rate heart-rate-variability arrhythmia mit-bih-arrhythmia mit-bih-database peak-detection ecg signal-processing
Language:Jupyter Notebook 45
originlab / Python-Samples
Code examples for using the originpro Python package to interact with Origin software.
curve-fitting data data-analysis data-visualization graphing graphs origin originlab originpro peak-detection plot-graph plotting python
Language:Python 33
jon-chun / sentimentarcs_notebooks
SentimentArcs: a large ensemble of dozens of sentiment analysis models to analyze emotion in text over time
affective ensemble ensemble-machine-learning feature-extraction finance machine-learning narrative narrative-extraction narrative-visualization natural-language-processing nlp peak-detection sentiment sentiment-analysis social-media story storytelling time-series time-series-analysis transformers
Language:Jupyter Notebook 32
CwbhX / Jamais-Vu
Audio Fingerprinting and Recognition in Python using NVidia's CUDA
audio audio-fingerprinting python gpu-acceleration cuda numpy pycuda mysql mp3 wave peak-detection scipy radio
Language:Python 28
bihealth / NeatMS
NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
neural-network lcms peak-detection
Language:Python 26
erdogant / caerus
Detection of favorable moments in time series data
optimization-algorithms peak-analysis peak-detection python stock-data time-series time-series-analysis trading trading-strategies
Language:Python 19
NASA-gamma
mauricioAyllon / NASA-gamma
Gamma spectroscopy tools originally developed to analyze gamma spectra for the BECA/DALI program at NASA Goddard Space Flight Center
gamma-ray gui peak-detection spectroscopy
Language:Python 18
ArthurBeaulieu / BeatDetect.js
Beat detector for audio files. KISS, light and library free.
bpm bpm-offset es6-module javascript peak-detection
Language:JavaScript 14
caravagnalab / CNAqc
CNAqc - Copy Number Alteration (CNA) Quality Check package
copy-number-variation quality-check genomics karyotype peak-detection
Language:R 14
IDSL.IPA
idslme / IDSL.IPA
Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidomics, exposomics, and environmental studies.
metabolomics lipidomics exposome mass-spectrometry feature-detection peak-detection small-molecule cran r untargeted-metabolomics peak-picking
Language:R 14
sorenwacker / ms-peakonly
Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
metabolomics neural-network peak-detection python mass-spectrometry lcms
Language:Jupyter Notebook 13
bhklab / CREAM
CREAM (Clustering of Functional Regions Analysis Method) is a new method for identification of clusters of functional regions (COREs) within chromosomes.
peak-detection functional-prediction clustering biomedical-informatics
Language:R 12
wfinsinger / tapas
Trend And PeAkS (TAPAS) analysis of temporal series (e.g. paleoecological records) to assess long-term trend and detect events (and eventually estimate event-return intervals)
paleoecology peak-detection paleofire trend timeseries-analysis
Language:R 11
cbrnr / HeartBeats.jl
ecg heartrate peak-detection julia
Language:Julia 10
eyal-lezmy / peak-detector
Detect peaks on an input signal
arduino arduino-library cpp-library peak-detection
Language:C++ 9
adityatripathiiit / Pan_Tompkins_QRS_Detection
Python Implementation of Pan Tompkins Algorithm for QRS peak detection
qrs-detection qrs pan-tompkins python peak-detection signal-processing-algorithms signal-processing ecg-signal ecg mit-bih-arrhythmia mit-bih-database heart-rate hrv heart-rate-variability heart-rate-monitor real-time real-time-heart-rate
Language:Jupyter Notebook 8
falseywinchnet / PyITD
Intrinsic Time-Scale Decomposition
decomposition knot numba numpy peak-detection python3 signal-processing trend-analysis emperical-analysis
Language:Jupyter Notebook 6
vganjali / PCWA
A highly parallel and fast event detector based on CWT transform.
cwt event-detection multiscale parallel-computing peak-detection python wavelet
Language:Python 6
JC3 / ZScorePeakDetection
A Qt port of the peak detection algorithm demo from https://stackoverflow.com/a/22640362, with interactive parameters.
peak-detection qt signal-processing stackoverflow statistical-analysis statistics z-score
Language:C++ 5
tkimhofer / msbrowser
An RShiny dashboard for visualisation of mass spectrometry (MS) data and fine-tuning of xcms pre-processing parameters
xcms peak-detection parameter-tuning visualization rpackage shiny-apps plotly metabolomics metabonomics
Language:R 5
BMSTU-team / vector_ECG_team_project
Командный проект по Векторной электрокардиографии
catboost-classifier ecg peak-detection vector-ecg
Language:Jupyter Notebook 4
krispir / cpc
The purpose of the cpc package is primarily to characterize the peaks detected using a separate peak detection method. Currently the only supported preprocessing software is XCMS.
xcms peak-detection data-processing
Language:C++ 4
mkgeiger / gamma-spectroscopy
Gamma Ray spectroscopy with an ESP32 microcontroller connected to a silcicon photomultiplier (SiPM)
detector energy esp32 gamma-ray gamma-spectroscopy isotope photomultiplier radiation radioactivity scintillator sipm spectrum mcp3201 peak-detection opa2354 kev 2-way-low-pass-filter differential-nonlinearity gamma pulse-diskriminator
Language:C++ 4
RealPolitiX / peakfind2D
A peak-finding routine in Matlab for (electron) diffraction images
diffraction-pattern matlab peak-detection
Language:Matlab 4
RECETOX / recetox-aplcms
This is a custom fork of apLCMS containing adaptations for large scale studies.
mass-spectrometry peak-detection lcms hacktoberfest
Language:R 4
SvrAdityaReddy / RTOS
Coursework of Real Time Operating Systems Course
c processes thread savitzky-golay peak-detection wiringpi rpi2 rpi-gpio arduino-uno interprocess-communication
Language:C 4