image-stacks

There are 0 repository under image-stacks topic.

• BiologyTools / BioImager

  A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.

  imagingmicroscopyimage-stacksimagejscriptingimagej-macrowhole-slide-imagingmicroscopemicroscope-controlmicroscope-stage-controllerimage-acquisitionmicro-managerhistologyplugin
  Language:C# 11

• BiologyTools / BioGTK

  A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.

  bio-formatsbiologygtkimage-stacksimagejmicroscopyroicross-platformomeroimagej-roiimagej-tiffwhole-slide-imagesegment-anythingsegment-anything-modelopenslidepluginsgeojsonqupath
  Language:C# 8

• eadf / libstacker.rs

  Image stacker based on OpenCV-rust

  image-stacksopencvrust
  Language:Rust 4

• woeishi / VVVV.DX11.Player

  VVVV node for high performance playback of image stacks in dx11

  directxdx11vvvvimage-stacks
  Language:C# 4

• DACUS1995 / image-stacker

  image-registrationimage-stacksopencvorbakazeecc
  Language:Python 1

• sRassmann / canny3d-thresholder

  ImageJ plugin to preform image binarization based on a canny edge detection in 3 dimensions

  canny-edge-detectionimagej-pluginsimagejimage-stacksciliaq-workflow
  Language:Java 1

• mmohn / SER_Reader

  ImageJ reader plugin for TIA (Emispec) .ser image files

  readerimage-stacksreader-pluginimagejimagej-plugins
  Language:Java 0

• Peter-T-Ruehr / checkpoint_converter

  Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.

  geometric-morphometricsrcheckpointimagejimagej-macrozoologybotanybiologytomographymicro-ctmriimage-stacks
  Language:ImageJ Macro 0

• Peter-T-Ruehr / stack_cropping

  ImageJ/Fiji macro that crops any given image stack without having to load it into memory first.

  micro-cttomographyimage-stackscropping-imagesconversionimagejfijiimage-macromrihistologybiologymaterial-science
  Language:ImageJ Macro 0

• hansenjn / ExtractSharpestPlane_JNH

  ExtractSharpestPlane_JNH is an ImageJ/FIJI plugin to automatically extract the sharpest plane by highest SD from image stacks for large data sets.

  imagej-pluginsimagej-pluginfiji-pluginmicroscopy-imagesz-stackimage-stackszeiss-czi-files
  Language:Java