micro-ct

There are 0 repository under micro-ct topic.

MPLBM-UT
je-santos / MPLBM-UT
Library for performing multiphase simulations (based on the Shan-Chen model) in complicated geometries (i.e. porous media 3D images)
lattice-boltzmann porous-media-flow porous-media micro-ct permeability tortuosity rock images volumes multiphase-flow multiphase reactive shan-chen mrt fractures palabos parallel pore-network relative-permeability cfd
Language:Python 147
Franjcf / hybridPorousInterFoam
OpenFOAM solver for performing single- and two-phase flow simulations on hybrid-scale porous media.
openfoam porous-media-flow porous-media multiphase fractures coastal-engineering micro-ct cfd capillary-pressure relative-permeability
Language:C++ 92
MIPT-Oulu / mCTSegmentation
Deep-Learning for Tidemark Segmentation in Human Osteochondral Tissues Imaged with Micro-computed Tomography
pytorch osteoarthritis deep-learning micro-ct pathology 3d
Language:Python 41
ImperialCollegeLondon / porefoam
Direct pore-scale simulation of single- and two-phase flow through confined media (alpha-release / experimental)
cfd openfoam pore-scale modelling two-phase-flow direct-simulation single-phase-flow navier-stokes micro-ct ielectrical-resistivity heat-transfer
Language:C 23
mizutanilab / RecView
Reconstruction and image processing of micro-CT/nano-CT data taken at SPring-8 and APS Argonne.
tomography reconstruction spring-8 argonne micro-ct nano-ct 3d cuda
Language:C++ 13
KitwareMedical / ITKIOScanco
ITK Image IO for Scanco MicroCT .ISQ files
itk-module scanco imaging micro-ct
Language:C++ 12
aliraeini / porescale
pore-scale micro-ct image pnextract pnflow libvoxel porefoam contact-angle
Language:Shell 11
NPPC-UK / microCT_grain_analyser
Software for processing output of Scanco uCT machines/ any ISQ or TIF producing machine, and producing data. See instructions.pdf for full explaination.
3d image-processing biology ct-scans micro-ct bioinformatics plants
Language:MATLAB 7
InsightSoftwareConsortium / ITKBoneEnhancement
itk-module itk bone micro-ct computed-tomography
Language:C++ 5
InsightSoftwareConsortium / ITKRingArtifact
ITK filters to reduce ring artifacts common in x-ray computed tomography.
itk-module itk ring-artifact image-processing computed-tomography micro-ct
Language:C++ 5
mizutanilab / MCTrace
GUI-based neuronal network model building
brain 3d-network model-building tomography micro-ct directx
2
martijnende / microTrack
A particle tracking library
particle-tracking micro-ct python
Language:Python 1
PorousMedia / xray_to_pore_size_distribution
The notebook demonstrates the workflow for obtaining pore size distribution from binarized micro-CT images. The general principle involves identifying each pore, estimating the volume of each pore, and ultimately determining the radius of a sphere with an equivalent volume of each pore.
micro-ct modeling petrophysics pore-network pore-size-distribution size xray-images pore-microstructures flow fluid-simulation fluids permeability pore-scale porespy
Language:Jupyter Notebook 1
Peter-T-Ruehr / Adaptive_decoupling_insects
Code used to analyze adaptive decoupling in insects.
earwigs dermaptera stoneflies plecoptera evolution ecology metamorphosis geometric-morphometrics micro-ct tomography 3d entomology insects zoology biology evolutionary-ecology
Language:R 0
Peter-T-Ruehr / checkpoint_converter
Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.
geometric-morphometrics r checkpoint imagej imagej-macro zoology botany biology tomography micro-ct mri image-stacks
Language:ImageJ Macro 0
Peter-T-Ruehr / stack_cropping
ImageJ/Fiji macro that crops any given image stack without having to load it into memory first.
micro-ct tomography image-stacks cropping-images conversion imagej fiji image-macro mri histology biology material-science
Language:ImageJ Macro 0
ouroboros
We-Gold / ouroboros
Extract ROIs (e.g. nerves, blood vessels) from multi-terabyte cloud-hosted medical scans.
binary-space-partitioning cloud-files cloud-volume electron interpolation micro-ct neuroglancer python react segmentation splines threejs typescript rotation-minimizing-frames data-visualization docker docker-compose
Language:Python 0