micro-manager

There are 1 repository under micro-manager topic.

• pymmcore-plus / napari-micromanager

  GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets

  micro-managermicroscopynaparipython
  Language:Python 57

• pymmcore-plus / pymmcore-plus

  Pure python/C++ micro-manager ecosystem

  micro-managerpythonmicroscopy
  Language:Python 21

• nimwegenLab / MiM_NikonTi

  Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.

  micro-managermicroscopynikon-eclipse-ti
  Language:C++ 20

• BiologyTools / BioImager

  A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.

  imagingmicroscopyimage-stacksimagejscriptingimagej-macrowhole-slide-imagingmicroscopemicroscope-controlmicroscope-stage-controllerimage-acquisitionmicro-managerhistologyplugin
  Language:C# 11

• pymmcore-plus / pymmcore-widgets

  A set of Qt-based widgets onto the pymmcore-plus model

  guimicro-managermicroscopypython
  Language:Python 8

• SRMLabHUST / QC-STORM

  Online processing plugin (Micro-Manager & ImageJ) for quality-controlled super-resolution localization imaging.

  localization-microscopyimagejmicro-managerlocalization-densitylocalization-precisionmle-localization
  Language:C++ 7

• hadim / mm_scripts

  A collection of scripts related to Micro-Manager.

  micro-managermicroscopejavaimagejfijiimagej2
  Language:Shell 3

• bryantChhun / mm2Python

  micro-manager 2.0 plugin that enables python control using Py4j remote procedure calls and IPC data transfer using memory mapped files

  py4jipc-data-transferchan-zuckerberg-biohubpythonmicro-manager
  Language:Java 2

• mariavmukhina / ScopeScript

  Matlab microscope control software integrated with custom TTL controller for acquisition of 4D datasets with up to sub-millisecond temporal resolution

  micro-managermicroscope-controlmicroscope-stage-controllerdevice-adaptermicro-manipulationnikon-ti2
  Language:MATLAB 2

• MStefko / ImageInjectorPlugin

  MicroManager 2.0 plugin for injecting external images into the processing pipeline, bypassing the need to acquire images in real time by a camera.

  micro-managerpluginjavaimage-processing
  Language:Java 1

• pymmcore-plus / pymmcore-midi

  MIDI Device control for microscopes using pymmcore

  micro-managermidipymmcorepymmcore-plus
  Language:Python 0

• QBioLab / MatlabCallMM

  Configure and example: Use Matlab call Micro-Manager to control microscope

  matlabmicro-managermicroscopy
  Language:Jupyter Notebook 0

• rhoitink / pycro-manager-controlpanel

  Software to interface a physical control panel with micro-manager via pycromanager

  hardware-hackingmicro-managermicroscopypycro-manager
  Language:Python 0