There are 0 repository under biobank topic.
Tools for extracting the raw optical coherence tomography (OCT) and fundus data from proprietary file formats.
An R package to manipulate and explore UK Biobank data
LImBuS is an open source, standards compliant Biobank Information Management System developed by researchers from Aberystwyth University.
Biorepository application for tracking biospecimens.
The Minimum Information About BIobank data Sharing (MIABIS) is a biobank-specific terminology enabling the sharing of minimal biobank-related data for different purposes across a wide range of database implementations.
Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
This is the source for the BBMRI.de / GBA Implementation Guide.
The BBMRI-ERIC Negotiator service for structured negotiation with biological resources dealing with human data and/or biological samples.
Functions to analyse UK Biobank genetic data directly from DNA Nexus' RStudio Workbench
An Open-source access negotation system for Research Infrastructures
The BBMRI-ERIC Negotiator is a service for structured negotiation with biological resources dealing with human data and/or biological samples. The reference implementation for the frontend is available in this repository.
Command line tool written in c++ for easily extracting light and temperature data from Axivity AX3 accelerometers used in the UKBiobank
Multiresponse time-to-event Cox proportional hazards model - CPU
A data integration tool for BBMRI-ERIC biobanks.
exploration of TreeWas/TreeWas2 code for the Zaitlen lab. Based on TreeWas developed by McVean Lab @ Oxford.
A script that will download meta-data from the UK Biobank website (https://www.ukbiobank.ac.uk).
Multiresponse time-to-event Cox proportional hazards model - GPU
A deep learning framwork for lung cancer prediction
An object oriented wrapper and tooling for the OpenSpecimen API, written in Python
This project provides a tool to assist biobanks with prioritising species for conservation and research.
This repository provides our generic test protocol for the integration test of ASS.