MOLGENIS - open source solutions for scientific data (molgenis)

MOLGENIS - open source solutions for scientific data

molgenis

Geek Repo

Location:The Netherlands, Europe

Home Page:https://www.molgenis.org

Github PK Tool:Github PK Tool

MOLGENIS - open source solutions for scientific data's repositories

vip

Variant Interpretation Pipeline

Language:ShellLicense:LGPL-3.0Stargazers:23Issues:6Issues:130
Language:PythonLicense:LGPL-3.0Stargazers:22Issues:5Issues:53

molgenis-emx2

MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

Language:VueLicense:LGPL-3.0Stargazers:14Issues:12Issues:907

vite-plugin-inline

Vite plugin that embeds .js and .css as base85 data

Language:TypeScriptLicense:LGPL-3.0Stargazers:10Issues:5Issues:1

molgenis-tools-commander

A command line interface for MOLGENIS

Language:CSSLicense:LGPL-3.0Stargazers:8Issues:11Issues:65

molgenis-service-armadillo

Armadillo; a DataSHIELD implementation, part of the MOLGENIS suite

Language:JavaLicense:LGPL-3.0Stargazers:7Issues:13Issues:186

molgenis-r-auth

Discover and authenticate against an OpenID server from R

Language:RLicense:GPL-3.0Stargazers:6Issues:12Issues:2

vip-inheritance-matcher

annotates VCF samples with denovo and possible compound flags and matching inheritance modes

Language:JavaLicense:LGPL-3.0Stargazers:5Issues:5Issues:11
Language:ShellLicense:LGPL-3.0Stargazers:4Issues:14Issues:19

vip-report-template

Report template for Variant Call Format (VCF) Report generator

Language:TypeScriptLicense:LGPL-3.0Stargazers:4Issues:5Issues:92

molgenis-r-armadillo

Client to manage shared files in the MOLGENIS Armadillo suite from R

Language:ShellLicense:LGPL-3.0Stargazers:3Issues:23Issues:4

vip-decision-tree

Decision tree module for the Variant Interpretation Pipeline (vip)

Language:JavaLicense:LGPL-3.0Stargazers:3Issues:5Issues:12

asterix

Automated PGx pipeline

Language:JavaStargazers:2Issues:6Issues:0
Language:RStargazers:2Issues:0Issues:0

metabrain

Various scripts to process RNAseq data for brain eQTL analysis

Language:PythonStargazers:2Issues:2Issues:0

vip-report-api

Report API for Variant Call Format (VCF) Report templates

Language:TypeScriptLicense:LGPL-3.0Stargazers:2Issues:0Issues:0

vip-report-vcf

TypeScript VCF library with support for both reading and writing

Language:TypeScriptLicense:LGPL-3.0Stargazers:2Issues:5Issues:3

capice-resources

Repository for resource files for CAPICE and updating CAPICE model

Language:PythonLicense:LGPL-3.0Stargazers:1Issues:3Issues:21
Language:RStargazers:1Issues:0Issues:0

projects-solve-rd

All things related to maintaining the RD3 database

Language:PythonLicense:GPL-3.0Stargazers:1Issues:5Issues:2
Language:PythonLicense:GPL-3.0Stargazers:1Issues:14Issues:0

molgenis.org

Source code of the (new) website for MOLGENIS

Language:CSSLicense:LGPL-3.0Stargazers:0Issues:20Issues:7

vkgl-history-analytics

A tool that parses VKGL variant classification data from public releases, connects variants across time and provides insights by visualizing different aspects.

Language:JavaLicense:LGPL-3.0Stargazers:0Issues:0Issues:0
Language:ShellLicense:LGPL-3.0Stargazers:0Issues:7Issues:2
Language:PythonLicense:GPL-3.0Stargazers:0Issues:0Issues:0
Language:PerlStargazers:0Issues:5Issues:1

vip-utils

Shared utils and resources for VIP modules and tools

Language:JavaLicense:LGPL-3.0Stargazers:0Issues:0Issues:0

vip-web

Variant Interpretation Pipeline web interface

Language:JavaLicense:LGPL-3.0Stargazers:0Issues:4Issues:0