MOLGENIS - open source solutions for scientific data (molgenis)

MOLGENIS - open source solutions for scientific data

molgenis

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Location:The Netherlands, Europe

Home Page:https://www.molgenis.org

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MOLGENIS - open source solutions for scientific data's repositories

systemsgenetics

Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

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vip

Variant Interpretation Pipeline

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NGS_DNA

NGS DNA best practice pipeline for Illumina sequencing - alignment, variant calling, annotation and QC

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molgenis-emx2

MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

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molgenis-tools-commander

A command line interface for MOLGENIS

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molgenis-service-armadillo

Armadillo; a DataSHIELD implementation, part of the MOLGENIS suite

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molgenis-r-auth

Discover and authenticate against an OpenID server from R

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Graph2VR

Visualising / Exploring Linked Data (SPARQL Construct queries) in Virtual Reality.

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molgenis-r-armadillo

Client to manage shared files in the MOLGENIS Armadillo suite from R

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vip-decision-tree

Decision tree module for the Variant Interpretation Pipeline (vip)

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GAP

Genotyping Array Pipeline

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metabrain

Various scripts to process RNAseq data for brain eQTL analysis

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gdi-localportal

GDI implementation of Local portal: a Molgenis connected to REMS, with Keycloak and Postgres

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PGx-pipeline

Farmacogenetics pipeline

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projects-solve-rd

All things related to maintaining the RD3 database

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molgenis-projects

Repository containing settings, configuration files, and public data for different MOLGENIS project servers

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molgenis-py-bbmri-eric

MOLGENIS Python tooling for BBMRI-ERIC

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molgenis-r-datashield

Armadillo implementation of DSI to be DataSHIELD ready, part of the MOLGENIS suite

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straglr

Fork of the version of the Straglr tool adapted by philres

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