MOLGENIS - open source solutions for scientific data (molgenis)

MOLGENIS - open source solutions for scientific data

molgenis

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Location:The Netherlands, Europe

Home Page:https://www.molgenis.org

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MOLGENIS - open source solutions for scientific data's repositories

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vip

Variant Interpretation Pipeline

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cluster-utils

Collection of utilities / helper scripts to make life easier on our HPC clusters.

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ngs-utils

Collection of notes and scripts related to NGS

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molgenis-emx2

MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

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molgenis-service-armadillo

Armadillo; a DataSHIELD implementation, part of the MOLGENIS suite

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vip-report-template

Report template for Variant Call Format (VCF) Report generator

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Graph2VR

Visualising / Exploring Linked Data (SPARQL Construct queries) in Virtual Reality.

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molgenis-r-armadillo

Client to manage shared files in the MOLGENIS Armadillo suite from R

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asterix

Automated PGx pipeline

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capice-resources

Repository for resource files for CAPICE and updating CAPICE model

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GAP

Genotyping Array Pipeline

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gdi-localportal

GDI implementation of Local portal: a Molgenis connected to REMS, with Keycloak and Postgres

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metabrain

Various scripts to process RNAseq data for brain eQTL analysis

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PGx-pipeline

Farmacogenetics pipeline

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projects-solve-rd

All things related to maintaining the RD3 database

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depad-utils

Utilities for deploy admins

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spatial_fat

spatial FAT study, using spatial transcriptomics on fat tissue

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straglr

Fork of the version of the Straglr tool adapted by philres

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vip-report-app

Variant Interpretation Pipeline report application

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vip-web

Variant Interpretation Pipeline web interface

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